Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
OPJ56016.1 | fapR | CLOTH_11940 | CLOTH_02100 | Hypothetical protein. | Transcription factor FapR. | 0.754 |
OPJ56931.1 | acpP_1 | CLOTH_02130 | CLOTH_02160 | Nitronate monooxygenase. | Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis. | 0.883 |
OPJ56931.1 | echA8 | CLOTH_02130 | CLOTH_13040 | Nitronate monooxygenase. | Putative enoyl-CoA hydratase echA8; Belongs to the enoyl-CoA hydratase/isomerase family. | 0.604 |
OPJ56931.1 | fabD | CLOTH_02130 | CLOTH_02140 | Nitronate monooxygenase. | Malonyl CoA-acyl carrier protein transacylase. | 0.968 |
OPJ56931.1 | fabF | CLOTH_02130 | CLOTH_02170 | Nitronate monooxygenase. | 3-oxoacyl-[acyl-carrier-protein] synthase 2; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. | 0.989 |
OPJ56931.1 | fabG_1 | CLOTH_02130 | CLOTH_02150 | Nitronate monooxygenase. | 3-oxoacyl-[acyl-carrier-protein] reductase FabG; Catalyzes the NADPH-dependent reduction of beta-ketoacyl-ACP substrates to beta-hydroxyacyl-ACP products, the first reductive step in the elongation cycle of fatty acid biosynthesis. Belongs to the short-chain dehydrogenases/reductases (SDR) family. | 0.909 |
OPJ56931.1 | fabHA | CLOTH_02130 | CLOTH_02120 | Nitronate monooxygenase. | 3-oxoacyl-[acyl-carrier-protein] synthase 3 protein 1; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched-chain and/or straight-chain of fatty acids; Belongs to the thiolase-like superfamily. FabH family. | 0.891 |
OPJ56931.1 | fapR | CLOTH_02130 | CLOTH_02100 | Nitronate monooxygenase. | Transcription factor FapR. | 0.781 |
OPJ56931.1 | plsX | CLOTH_02130 | CLOTH_02110 | Nitronate monooxygenase. | Phosphate acyltransferase; Catalyzes the reversible formation of acyl-phosphate (acyl- PO(4)) from acyl-[acyl-carrier-protein] (acyl-ACP). This enzyme utilizes acyl-ACP as fatty acyl donor, but not acyl-CoA. | 0.827 |
acpP_1 | OPJ56931.1 | CLOTH_02160 | CLOTH_02130 | Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis. | Nitronate monooxygenase. | 0.883 |
acpP_1 | adhE | CLOTH_02160 | CLOTH_11210 | Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis. | Aldehyde-alcohol dehydrogenase; In the C-terminal section; belongs to the iron-containing alcohol dehydrogenase family. | 0.785 |
acpP_1 | echA8 | CLOTH_02160 | CLOTH_13040 | Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis. | Putative enoyl-CoA hydratase echA8; Belongs to the enoyl-CoA hydratase/isomerase family. | 0.412 |
acpP_1 | fabD | CLOTH_02160 | CLOTH_02140 | Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis. | Malonyl CoA-acyl carrier protein transacylase. | 0.997 |
acpP_1 | fabF | CLOTH_02160 | CLOTH_02170 | Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis. | 3-oxoacyl-[acyl-carrier-protein] synthase 2; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. | 0.990 |
acpP_1 | fabG_1 | CLOTH_02160 | CLOTH_02150 | Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis. | 3-oxoacyl-[acyl-carrier-protein] reductase FabG; Catalyzes the NADPH-dependent reduction of beta-ketoacyl-ACP substrates to beta-hydroxyacyl-ACP products, the first reductive step in the elongation cycle of fatty acid biosynthesis. Belongs to the short-chain dehydrogenases/reductases (SDR) family. | 0.805 |
acpP_1 | fabHA | CLOTH_02160 | CLOTH_02120 | Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis. | 3-oxoacyl-[acyl-carrier-protein] synthase 3 protein 1; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched-chain and/or straight-chain of fatty acids; Belongs to the thiolase-like superfamily. FabH family. | 0.827 |
acpP_1 | fapR | CLOTH_02160 | CLOTH_02100 | Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis. | Transcription factor FapR. | 0.676 |
acpP_1 | plsX | CLOTH_02160 | CLOTH_02110 | Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis. | Phosphate acyltransferase; Catalyzes the reversible formation of acyl-phosphate (acyl- PO(4)) from acyl-[acyl-carrier-protein] (acyl-ACP). This enzyme utilizes acyl-ACP as fatty acyl donor, but not acyl-CoA. | 0.711 |
adhE | acpP_1 | CLOTH_11210 | CLOTH_02160 | Aldehyde-alcohol dehydrogenase; In the C-terminal section; belongs to the iron-containing alcohol dehydrogenase family. | Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis. | 0.785 |
adhE | echA8 | CLOTH_11210 | CLOTH_13040 | Aldehyde-alcohol dehydrogenase; In the C-terminal section; belongs to the iron-containing alcohol dehydrogenase family. | Putative enoyl-CoA hydratase echA8; Belongs to the enoyl-CoA hydratase/isomerase family. | 0.937 |
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