STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OPJ56936.1Hypothetical protein; Transcription termination factor Rho. (323 aa)    
Predicted Functional Partners:
OPJ56942.1
Hypothetical protein.
 
  
 0.982
OPJ56937.1
Stage III sporulation protein SpoAB.
 
  
 0.978
OPJ56938.1
Stage III sporulation protein AC/AD protein family protein.
 
  
 0.978
spoIIIAE
Stage III sporulation protein AE precursor.
 
  
 0.977
OPJ56943.1
SpoIIIAH-like protein.
 
  
 0.970
OPJ56939.1
Stage III sporulation protein AC/AD protein family protein.
 
  
 0.969
spoIVA
Stage IV sporulation protein A; ATPase. Has a role at an early stage in the morphogenesis of the spore coat.
  
  
 0.907
OPJ56941.1
Stage III sporulation protein SpoIIIAF.
 
  
 0.880
spoIIID
Stage III sporulation protein D.
  
   
 0.870
OPJ54808.1
Stage II sporulation protein SpoIIR.
  
  
 0.861
Your Current Organism:
Clostridium thermoalcaliphilum
NCBI taxonomy Id: 29349
Other names: ATCC 51508, CIP 105528, DSM 7309, [. thermoalcaliphilum, [Clostridium] thermoalcaliphilum, strain JW/YL23-2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.