Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
OPJ56939.1Stage III sporulation protein AC/AD protein family protein. (128 aa)    
Predicted Functional Partners:
spoIIIAE
Stage III sporulation protein AE precursor.
 
  
 0.996
OPJ56938.1
Stage III sporulation protein AC/AD protein family protein.
 
  
 0.989
OPJ56936.1
Hypothetical protein; Transcription termination factor Rho.
 
  
 0.986
OPJ56941.1
Stage III sporulation protein SpoIIIAF.
 
  
 0.983
OPJ56942.1
Hypothetical protein.
 
  
 0.976
OPJ56937.1
Stage III sporulation protein SpoAB.
 
  
 0.960
spoIVA
Stage IV sporulation protein A; ATPase. Has a role at an early stage in the morphogenesis of the spore coat.
  
  
 0.941
OPJ56943.1
SpoIIIAH-like protein.
 
  
 0.925
OPJ55597.1
Stage II sporulation protein SpoIIP.
  
   
 0.832
spo0A_1
Stage 0 sporulation protein A; May play the central regulatory role in sporulation. It may be an element of the effector pathway responsible for the activation of sporulation genes in response to nutritional stress. Spo0A may act in concert with spo0H (a sigma factor) to control the expression of some genes that are critical to the sporulation process.
 
   
 0.825
Your Current Organism:
Clostridium thermoalcaliphilum
NCBI taxonomy Id: 29349
Other names: ATCC 51508, CIP 105528, DSM 7309, [. thermoalcaliphilum, [Clostridium] thermoalcaliphilum, strain JW/YL23-2
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