STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OPJ56941.1Stage III sporulation protein SpoIIIAF. (186 aa)    
Predicted Functional Partners:
spoIIIAE
Stage III sporulation protein AE precursor.
 
  
 0.990
OPJ56939.1
Stage III sporulation protein AC/AD protein family protein.
 
  
 0.975
OPJ56937.1
Stage III sporulation protein SpoAB.
 
  
 0.973
OPJ56942.1
Hypothetical protein.
 
  
 0.959
OPJ56943.1
SpoIIIAH-like protein.
 
  
 0.951
OPJ56938.1
Stage III sporulation protein AC/AD protein family protein.
  
  
 0.905
OPJ56936.1
Hypothetical protein; Transcription termination factor Rho.
 
  
 0.880
OPJ56341.1
Hypothetical protein.
  
     0.767
OPJ57281.1
Inner membrane protein.
  
     0.765
OPJ55070.1
Hypothetical protein.
  
     0.764
Your Current Organism:
Clostridium thermoalcaliphilum
NCBI taxonomy Id: 29349
Other names: ATCC 51508, CIP 105528, DSM 7309, [. thermoalcaliphilum, [Clostridium] thermoalcaliphilum, strain JW/YL23-2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.