cca_1 protein (Clostridium thermoalcaliphilum)

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Predicted Interactions

gene neighborhood

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textmining

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Score

cca_1

CCA-adding enzyme. (447 aa)

Predicted Functional Partners:

birA

0.939

dapB

0.823

mgsA

0.806

pnp

0.803

hfq

0.767

rny_2

0.722

glmM

0.709

metG

0.626

nudF

0.563

ppiB

0.548

Your Current Organism:

Clostridium thermoalcaliphilum

NCBI taxonomy Id: 29349
Other names: ATCC 51508, CIP 105528, DSM 7309, [. thermoalcaliphilum, [Clostridium] thermoalcaliphilum, strain JW/YL23-2

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
birA	cca_1	CLOTH_19460	CLOTH_02390	Bifunctional ligase/repressor BirA; Acts both as a biotin--[acetyl-CoA-carboxylase] ligase and a repressor; Belongs to the biotin--protein ligase family.	CCA-adding enzyme.	0.939
birA	dapB	CLOTH_19460	CLOTH_08230	Bifunctional ligase/repressor BirA; Acts both as a biotin--[acetyl-CoA-carboxylase] ligase and a repressor; Belongs to the biotin--protein ligase family.	4-hydroxy-tetrahydrodipicolinate reductase; Catalyzes the conversion of 4-hydroxy-tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate; Belongs to the DapB family.	0.791
birA	hfq	CLOTH_19460	CLOTH_04510	Bifunctional ligase/repressor BirA; Acts both as a biotin--[acetyl-CoA-carboxylase] ligase and a repressor; Belongs to the biotin--protein ligase family.	RNA-binding protein Hfq; RNA chaperone that binds small regulatory RNA (sRNAs) and mRNAs to facilitate mRNA translational regulation in response to envelope stress, environmental stress and changes in metabolite concentrations. Also binds with high specificity to tRNAs. Belongs to the Hfq family.	0.660
birA	metG	CLOTH_19460	CLOTH_17300	Bifunctional ligase/repressor BirA; Acts both as a biotin--[acetyl-CoA-carboxylase] ligase and a repressor; Belongs to the biotin--protein ligase family.	methionine--tRNA ligase; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation.	0.822
birA	mgsA	CLOTH_19460	CLOTH_12930	Bifunctional ligase/repressor BirA; Acts both as a biotin--[acetyl-CoA-carboxylase] ligase and a repressor; Belongs to the biotin--protein ligase family.	Methylglyoxal synthase; Catalyzes the formation of methylglyoxal from dihydroxyacetone phosphate.	0.839
birA	nudF	CLOTH_19460	CLOTH_02450	Bifunctional ligase/repressor BirA; Acts both as a biotin--[acetyl-CoA-carboxylase] ligase and a repressor; Belongs to the biotin--protein ligase family.	ADP-ribose pyrophosphatase; Belongs to the Nudix hydrolase family.	0.677
cca_1	birA	CLOTH_02390	CLOTH_19460	CCA-adding enzyme.	Bifunctional ligase/repressor BirA; Acts both as a biotin--[acetyl-CoA-carboxylase] ligase and a repressor; Belongs to the biotin--protein ligase family.	0.939
cca_1	dapB	CLOTH_02390	CLOTH_08230	CCA-adding enzyme.	4-hydroxy-tetrahydrodipicolinate reductase; Catalyzes the conversion of 4-hydroxy-tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate; Belongs to the DapB family.	0.823
cca_1	glmM	CLOTH_02390	CLOTH_20300	CCA-adding enzyme.	Phosphoglucosamine mutase; Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate; Belongs to the phosphohexose mutase family.	0.709
cca_1	hfq	CLOTH_02390	CLOTH_04510	CCA-adding enzyme.	RNA-binding protein Hfq; RNA chaperone that binds small regulatory RNA (sRNAs) and mRNAs to facilitate mRNA translational regulation in response to envelope stress, environmental stress and changes in metabolite concentrations. Also binds with high specificity to tRNAs. Belongs to the Hfq family.	0.767
cca_1	metG	CLOTH_02390	CLOTH_17300	CCA-adding enzyme.	methionine--tRNA ligase; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation.	0.626
cca_1	mgsA	CLOTH_02390	CLOTH_12930	CCA-adding enzyme.	Methylglyoxal synthase; Catalyzes the formation of methylglyoxal from dihydroxyacetone phosphate.	0.806
cca_1	nudF	CLOTH_02390	CLOTH_02450	CCA-adding enzyme.	ADP-ribose pyrophosphatase; Belongs to the Nudix hydrolase family.	0.563
cca_1	pnp	CLOTH_02390	CLOTH_04230	CCA-adding enzyme.	Polyribonucleotide nucleotidyltransferase; Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'- direction.	0.803
cca_1	ppiB	CLOTH_02390	CLOTH_11270	CCA-adding enzyme.	Peptidyl-prolyl cis-trans isomerase B; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family.	0.548
cca_1	rny_2	CLOTH_02390	CLOTH_04320	CCA-adding enzyme.	Ribonuclease Y; Endoribonuclease that initiates mRNA decay. Belongs to the RNase Y family.	0.722
dapB	birA	CLOTH_08230	CLOTH_19460	4-hydroxy-tetrahydrodipicolinate reductase; Catalyzes the conversion of 4-hydroxy-tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate; Belongs to the DapB family.	Bifunctional ligase/repressor BirA; Acts both as a biotin--[acetyl-CoA-carboxylase] ligase and a repressor; Belongs to the biotin--protein ligase family.	0.791
dapB	cca_1	CLOTH_08230	CLOTH_02390	4-hydroxy-tetrahydrodipicolinate reductase; Catalyzes the conversion of 4-hydroxy-tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate; Belongs to the DapB family.	CCA-adding enzyme.	0.823
dapB	metG	CLOTH_08230	CLOTH_17300	4-hydroxy-tetrahydrodipicolinate reductase; Catalyzes the conversion of 4-hydroxy-tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate; Belongs to the DapB family.	methionine--tRNA ligase; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation.	0.503
dapB	mgsA	CLOTH_08230	CLOTH_12930	4-hydroxy-tetrahydrodipicolinate reductase; Catalyzes the conversion of 4-hydroxy-tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate; Belongs to the DapB family.	Methylglyoxal synthase; Catalyzes the formation of methylglyoxal from dihydroxyacetone phosphate.	0.737