Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
OPJ56958.1Hypothetical protein; Thiamine pyrophosphokinase C terminal. (373 aa)    
Predicted Functional Partners:
OPJ56959.1
Hypothetical protein.
 
  
 0.982
OPJ56960.1
Undecaprenyl-phosphate mannosyltransferase.
 
     0.952
mraY_2
phospho-N-acetylmuramoyl-pentapeptide- transferase.
 
     0.952
OPJ56962.1
Hypothetical protein.
 
     0.947
OPJ57286.1
Hypothetical protein.
 
     0.782
nudF
ADP-ribose pyrophosphatase; Belongs to the Nudix hydrolase family.
       0.779
OPJ56964.1
Hypothetical protein.
       0.585
OPJ56739.1
Hypothetical protein.
  
     0.547
spo0A_1
Stage 0 sporulation protein A; May play the central regulatory role in sporulation. It may be an element of the effector pathway responsible for the activation of sporulation genes in response to nutritional stress. Spo0A may act in concert with spo0H (a sigma factor) to control the expression of some genes that are critical to the sporulation process.
       0.531
xerD_1
Tyrosine recombinase XerD; Belongs to the 'phage' integrase family.
       0.506
Your Current Organism:
Clostridium thermoalcaliphilum
NCBI taxonomy Id: 29349
Other names: ATCC 51508, CIP 105528, DSM 7309, [. thermoalcaliphilum, [Clostridium] thermoalcaliphilum, strain JW/YL23-2
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.