Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
OPJ56959.1Hypothetical protein. (288 aa)    
Predicted Functional Partners:
OPJ56958.1
Hypothetical protein; Thiamine pyrophosphokinase C terminal.
 
  
 0.982
mraY_2
phospho-N-acetylmuramoyl-pentapeptide- transferase.
 
     0.954
OPJ56960.1
Undecaprenyl-phosphate mannosyltransferase.
 
     0.939
OPJ56962.1
Hypothetical protein.
 
     0.937
nudF
ADP-ribose pyrophosphatase; Belongs to the Nudix hydrolase family.
       0.793
OPJ57286.1
Hypothetical protein.
 
     0.780
mepH
Murein DD-endopeptidase MepH precursor.
  
 
 
 0.758
OPJ55397.1
Hypothetical protein.
    
 
 0.725
OPJ54640.1
Hypothetical protein.
  
     0.683
OPJ55169.1
Hypothetical protein.
  
     0.655
Your Current Organism:
Clostridium thermoalcaliphilum
NCBI taxonomy Id: 29349
Other names: ATCC 51508, CIP 105528, DSM 7309, [. thermoalcaliphilum, [Clostridium] thermoalcaliphilum, strain JW/YL23-2
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.