STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cwlC_1Sporulation-specific N-acetylmuramoyl-L-alanine amidase. (227 aa)    
Predicted Functional Partners:
yaaH_1
Spore germination protein YaaH.
  
 
 0.944
cwlC_2
Sporulation-specific N-acetylmuramoyl-L-alanine amidase.
 
0.936
OPJ56791.1
Hypothetical protein.
   
 
 0.910
divIB
Cell division protein DivIB; Essential cell division protein.
  
 
 0.861
lytC
N-acetylmuramoyl-L-alanine amidase LytC precursor.
 
0.831
spoVD_1
Stage V sporulation protein D.
  
 0.785
cwlD
Germination-specific N-acetylmuramoyl-L-alanine amidase precursor.
  
0.769
amiC
N-acetylmuramoyl-L-alanine amidase AmiC precursor.
  
0.748
spoVD_2
Stage V sporulation protein D.
  
 0.729
mrdB
Rod shape-determining protein RodA; Peptidoglycan polymerase that is essential for cell wall elongation; Belongs to the SEDS family. MrdB/RodA subfamily.
  
 
 0.671
Your Current Organism:
Clostridium thermoalcaliphilum
NCBI taxonomy Id: 29349
Other names: ATCC 51508, CIP 105528, DSM 7309, [. thermoalcaliphilum, [Clostridium] thermoalcaliphilum, strain JW/YL23-2
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