Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
uvsEUV DNA damage endonuclease. (319 aa)    
Predicted Functional Partners:
cshA_1
DEAD-box ATP-dependent RNA helicase CshA.
       0.751
splB
Spore photoproduct lyase.
  
   
 0.624
yjjK
Putative ABC transporter ATP-binding protein YjjK.
 
     0.622
OPJ57013.1
Putative amidase domain protein.
 
     0.542
OPJ57069.1
KWG leptospira.
  
     0.521
guaB_1
Inosine-5'-monophosphate dehydrogenase.
       0.504
OPJ57224.1
Hypothetical protein.
  
     0.486
OPJ55386.1
Hypothetical protein.
 
     0.479
Your Current Organism:
Clostridium thermoalcaliphilum
NCBI taxonomy Id: 29349
Other names: ATCC 51508, CIP 105528, DSM 7309, [. thermoalcaliphilum, [Clostridium] thermoalcaliphilum, strain JW/YL23-2
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.