Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
nagBGlucosamine-6-phosphate deaminase 1; Catalyzes the reversible isomerization-deamination of glucosamine 6-phosphate (GlcN6P) to form fructose 6-phosphate (Fru6P) and ammonium ion. (252 aa)    
Predicted Functional Partners:
glcB
PTS system glucoside-specific EIICBA component.
 
 0.978
ptsG
PTS system glucose-specific EIICBA component.
 
 
 0.974
pgi
Glucose-6-phosphate isomerase; Belongs to the GPI family.
  
 
 0.937
glmM
Phosphoglucosamine mutase; Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate; Belongs to the phosphohexose mutase family.
  
 
 0.932
glmS
Glutamine--fructose-6-phosphate aminotransferase; Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source.
    
 0.931
malX_1
PTS system maltose- and glucose-specific EIICB component.
  
 
 0.776
sacX_1
Negative regulator of SacY activity.
  
 
 0.769
sacX_2
Negative regulator of SacY activity.
  
 
 0.769
treB
PTS system trehalose-specific EIIBC component.
  
 
 0.769
iolC
5-dehydro-2-deoxygluconokinase; Belongs to the carbohydrate kinase PfkB family.
  
 
 0.692
Your Current Organism:
Clostridium thermoalcaliphilum
NCBI taxonomy Id: 29349
Other names: ATCC 51508, CIP 105528, DSM 7309, [. thermoalcaliphilum, [Clostridium] thermoalcaliphilum, strain JW/YL23-2
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