yhaM protein (Clostridium thermoalcaliphilum)

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Score

yhaM

3'-5' exoribonuclease YhaM. (297 aa)

Predicted Functional Partners:

rny_2

0.637

OPJ57077.1

0.624

ribBA

0.484

OPJ57079.1

0.479

purL

0.458

topA

0.450

aprX

0.450

OPJ57076.1

0.446

metG

0.441

hemH

0.425

Your Current Organism:

Clostridium thermoalcaliphilum

NCBI taxonomy Id: 29349
Other names: ATCC 51508, CIP 105528, DSM 7309, [. thermoalcaliphilum, [Clostridium] thermoalcaliphilum, strain JW/YL23-2

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
OPJ57076.1	OPJ57077.1	CLOTH_03590	CLOTH_03600	Hypothetical protein.	Sepiapterin reductase; Belongs to the short-chain dehydrogenases/reductases (SDR) family.	0.667
OPJ57076.1	yhaM	CLOTH_03590	CLOTH_03610	Hypothetical protein.	3'-5' exoribonuclease YhaM.	0.446
OPJ57077.1	OPJ57076.1	CLOTH_03600	CLOTH_03590	Sepiapterin reductase; Belongs to the short-chain dehydrogenases/reductases (SDR) family.	Hypothetical protein.	0.667
OPJ57077.1	purL	CLOTH_03600	CLOTH_11620	Sepiapterin reductase; Belongs to the short-chain dehydrogenases/reductases (SDR) family.	Phosphoribosylformylglycinamidine synthase 2.	0.454
OPJ57077.1	yhaM	CLOTH_03600	CLOTH_03610	Sepiapterin reductase; Belongs to the short-chain dehydrogenases/reductases (SDR) family.	3'-5' exoribonuclease YhaM.	0.624
OPJ57079.1	yhaM	CLOTH_03620	CLOTH_03610	YibE/F-like protein.	3'-5' exoribonuclease YhaM.	0.479
aprX	hemH	CLOTH_09900	CLOTH_01270	Serine protease AprX; Belongs to the peptidase S8 family.	Ferrochelatase.	0.468
aprX	yhaM	CLOTH_09900	CLOTH_03610	Serine protease AprX; Belongs to the peptidase S8 family.	3'-5' exoribonuclease YhaM.	0.450
hemH	aprX	CLOTH_01270	CLOTH_09900	Ferrochelatase.	Serine protease AprX; Belongs to the peptidase S8 family.	0.468
hemH	yhaM	CLOTH_01270	CLOTH_03610	Ferrochelatase.	3'-5' exoribonuclease YhaM.	0.425
metG	purL	CLOTH_17300	CLOTH_11620	methionine--tRNA ligase; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation.	Phosphoribosylformylglycinamidine synthase 2.	0.955
metG	rny_2	CLOTH_17300	CLOTH_04320	methionine--tRNA ligase; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation.	Ribonuclease Y; Endoribonuclease that initiates mRNA decay. Belongs to the RNase Y family.	0.647
metG	topA	CLOTH_17300	CLOTH_05850	methionine--tRNA ligase; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation.	DNA topoisomerase 1; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA- (5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supe [...]	0.803
metG	yhaM	CLOTH_17300	CLOTH_03610	methionine--tRNA ligase; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation.	3'-5' exoribonuclease YhaM.	0.441
purL	OPJ57077.1	CLOTH_11620	CLOTH_03600	Phosphoribosylformylglycinamidine synthase 2.	Sepiapterin reductase; Belongs to the short-chain dehydrogenases/reductases (SDR) family.	0.454
purL	metG	CLOTH_11620	CLOTH_17300	Phosphoribosylformylglycinamidine synthase 2.	methionine--tRNA ligase; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation.	0.955
purL	ribBA	CLOTH_11620	CLOTH_14300	Phosphoribosylformylglycinamidine synthase 2.	Riboflavin biosynthesis protein RibBA; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; In the C-terminal section; belongs to the GTP cyclohydrolase II family.	0.677
purL	topA	CLOTH_11620	CLOTH_05850	Phosphoribosylformylglycinamidine synthase 2.	DNA topoisomerase 1; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA- (5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supe [...]	0.672
purL	yhaM	CLOTH_11620	CLOTH_03610	Phosphoribosylformylglycinamidine synthase 2.	3'-5' exoribonuclease YhaM.	0.458
ribBA	purL	CLOTH_14300	CLOTH_11620	Riboflavin biosynthesis protein RibBA; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; In the C-terminal section; belongs to the GTP cyclohydrolase II family.	Phosphoribosylformylglycinamidine synthase 2.	0.677