Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
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Co-expression
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[Homology]
Score
OPJ57211.1Hypothetical protein. (143 aa)    
Predicted Functional Partners:
argG
Argininosuccinate synthase; Belongs to the argininosuccinate synthase family. Type 1 subfamily.
  
 
 0.809
nifJ
Pyruvate-flavodoxin oxidoreductase.
    
  0.792
rluB
Ribosomal large subunit pseudouridine synthase B; Belongs to the pseudouridine synthase RsuA family.
       0.771
argH
Argininosuccinate lyase.
  
 
 0.632
OPJ57210.1
methylmalonyl-CoA carboxyltransferase 5S subunit.
       0.571
purL
Phosphoribosylformylglycinamidine synthase 2.
     
 0.568
OPJ57213.1
Hypothetical protein.
       0.523
puuR
HTH-type transcriptional regulator PuuR.
    
  0.507
mshD
Mycothiol acetyltransferase; Acetylates the N-terminal alanine of ribosomal protein S18.
    
 0.472
pncC
Nicotinamide-nucleotide amidohydrolase PncC; Belongs to the CinA family.
       0.427
Your Current Organism:
Clostridium thermoalcaliphilum
NCBI taxonomy Id: 29349
Other names: ATCC 51508, CIP 105528, DSM 7309, [. thermoalcaliphilum, [Clostridium] thermoalcaliphilum, strain JW/YL23-2
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