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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
trxB_1Thioredoxin reductase. (286 aa)    
Predicted Functional Partners:
trxA_1
Thioredoxin; Belongs to the thioredoxin family.
 
 0.984
trxA_2
Thioredoxin; Belongs to the thioredoxin family.
 
 0.931
tsaA
Putative peroxiredoxin.
  
 
 0.872
prxU
Selenocysteine-containing peroxiredoxin PrxU; Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides.
  
 
 0.872
trxB_2
Thioredoxin reductase.
  
  
 
0.810
OPJ54937.1
Hypothetical protein.
   
 0.794
selD
Selenide, water dikinase; Synthesizes selenophosphate from selenide and ATP.
     
 0.789
mdeA
Methionine gamma-lyase.
   
 
 0.777
cdr
Coenzyme A disulfide reductase.
    
 0.762
glpE
Thiosulfate sulfurtransferase GlpE.
    
 0.762
Your Current Organism:
Clostridium thermoalcaliphilum
NCBI taxonomy Id: 29349
Other names: ATCC 51508, CIP 105528, DSM 7309, [. thermoalcaliphilum, [Clostridium] thermoalcaliphilum, strain JW/YL23-2
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