Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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from curated databases
textmining
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experimentally determined
co-expression
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gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
rihAPyrimidine-specific ribonucleoside hydrolase RihA. (290 aa)    
Predicted Functional Partners:
OPJ57268.1
Phosphotransferase enzyme family protein.
 
     0.871
phnV
Putative 2-aminoethylphosphonate transport system permease protein PhnV.
 
     0.842
cysT
Sulfate transport system permease protein CysT.
 
     0.842
OPJ57274.1
Hypothetical protein.
 
     0.828
cofC
2-phospho-L-lactate guanylyltransferase.
 
     0.807
thrZ_2
threonine--tRNA ligase 2.
  
 0.761
pgaC
poly-beta-1,6-N-acetyl-D-glucosamine synthase.
 
     0.730
gltD
Glutamate synthase small chain.
  
  
 0.645
polA_1
DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity.
     
 0.643
lutA
Lactate utilization protein A.
 
     0.634
Your Current Organism:
Clostridium thermoalcaliphilum
NCBI taxonomy Id: 29349
Other names: ATCC 51508, CIP 105528, DSM 7309, [. thermoalcaliphilum, [Clostridium] thermoalcaliphilum, strain JW/YL23-2
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