cymR protein (Clostridium thermoalcaliphilum)

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Score

cymR

HTH-type transcriptional regulator CymR. (142 aa)

Predicted Functional Partners:

iscS_1

0.954

iscU

0.950

iscS_2

0.817

mnmA

0.660

nifJ

0.641

fliG

0.519

cfiB

0.470

fur

0.406

Your Current Organism:

Clostridium thermoalcaliphilum

NCBI taxonomy Id: 29349
Other names: ATCC 51508, CIP 105528, DSM 7309, [. thermoalcaliphilum, [Clostridium] thermoalcaliphilum, strain JW/YL23-2

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
cfiB	cymR	CLOTH_05770	CLOTH_05760	2-oxoglutarate carboxylase small subunit; Catalyzes a 2-step reaction, involving the ATP-dependent carboxylation of the covalently attached biotin in the first step and the transfer of the carboxyl group to pyruvate in the second.	HTH-type transcriptional regulator CymR.	0.470
cfiB	iscS_1	CLOTH_05770	CLOTH_05750	2-oxoglutarate carboxylase small subunit; Catalyzes a 2-step reaction, involving the ATP-dependent carboxylation of the covalently attached biotin in the first step and the transfer of the carboxyl group to pyruvate in the second.	Cysteine desulfurase IscS; Master enzyme that delivers sulfur to a number of partners involved in Fe-S cluster assembly, tRNA modification or cofactor biosynthesis. Catalyzes the removal of elemental sulfur atoms from cysteine to produce alanine. Functions as a sulfur delivery protein for Fe-S cluster synthesis onto IscU, an Fe-S scaffold assembly protein, as well as other S acceptor proteins; Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family. NifS/IscS subfamily.	0.488
cfiB	iscU	CLOTH_05770	CLOTH_05740	2-oxoglutarate carboxylase small subunit; Catalyzes a 2-step reaction, involving the ATP-dependent carboxylation of the covalently attached biotin in the first step and the transfer of the carboxyl group to pyruvate in the second.	Iron-sulfur cluster assembly scaffold protein IscU.	0.441
cfiB	nifJ	CLOTH_05770	CLOTH_01250	2-oxoglutarate carboxylase small subunit; Catalyzes a 2-step reaction, involving the ATP-dependent carboxylation of the covalently attached biotin in the first step and the transfer of the carboxyl group to pyruvate in the second.	Pyruvate-flavodoxin oxidoreductase.	0.949
cymR	cfiB	CLOTH_05760	CLOTH_05770	HTH-type transcriptional regulator CymR.	2-oxoglutarate carboxylase small subunit; Catalyzes a 2-step reaction, involving the ATP-dependent carboxylation of the covalently attached biotin in the first step and the transfer of the carboxyl group to pyruvate in the second.	0.470
cymR	fliG	CLOTH_05760	CLOTH_03670	HTH-type transcriptional regulator CymR.	Flagellar motor switch protein FliG.	0.519
cymR	fur	CLOTH_05760	CLOTH_05650	HTH-type transcriptional regulator CymR.	Ferric uptake regulation protein; Belongs to the Fur family.	0.406
cymR	iscS_1	CLOTH_05760	CLOTH_05750	HTH-type transcriptional regulator CymR.	Cysteine desulfurase IscS; Master enzyme that delivers sulfur to a number of partners involved in Fe-S cluster assembly, tRNA modification or cofactor biosynthesis. Catalyzes the removal of elemental sulfur atoms from cysteine to produce alanine. Functions as a sulfur delivery protein for Fe-S cluster synthesis onto IscU, an Fe-S scaffold assembly protein, as well as other S acceptor proteins; Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family. NifS/IscS subfamily.	0.954
cymR	iscS_2	CLOTH_05760	CLOTH_16380	HTH-type transcriptional regulator CymR.	Cysteine desulfurase IscS.	0.817
cymR	iscU	CLOTH_05760	CLOTH_05740	HTH-type transcriptional regulator CymR.	Iron-sulfur cluster assembly scaffold protein IscU.	0.950
cymR	mnmA	CLOTH_05760	CLOTH_05730	HTH-type transcriptional regulator CymR.	tRNA-specific 2-thiouridylase MnmA; Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34.	0.660
cymR	nifJ	CLOTH_05760	CLOTH_01250	HTH-type transcriptional regulator CymR.	Pyruvate-flavodoxin oxidoreductase.	0.641
fliG	cymR	CLOTH_03670	CLOTH_05760	Flagellar motor switch protein FliG.	HTH-type transcriptional regulator CymR.	0.519
fur	cymR	CLOTH_05650	CLOTH_05760	Ferric uptake regulation protein; Belongs to the Fur family.	HTH-type transcriptional regulator CymR.	0.406
iscS_1	cfiB	CLOTH_05750	CLOTH_05770	Cysteine desulfurase IscS; Master enzyme that delivers sulfur to a number of partners involved in Fe-S cluster assembly, tRNA modification or cofactor biosynthesis. Catalyzes the removal of elemental sulfur atoms from cysteine to produce alanine. Functions as a sulfur delivery protein for Fe-S cluster synthesis onto IscU, an Fe-S scaffold assembly protein, as well as other S acceptor proteins; Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family. NifS/IscS subfamily.	2-oxoglutarate carboxylase small subunit; Catalyzes a 2-step reaction, involving the ATP-dependent carboxylation of the covalently attached biotin in the first step and the transfer of the carboxyl group to pyruvate in the second.	0.488
iscS_1	cymR	CLOTH_05750	CLOTH_05760	Cysteine desulfurase IscS; Master enzyme that delivers sulfur to a number of partners involved in Fe-S cluster assembly, tRNA modification or cofactor biosynthesis. Catalyzes the removal of elemental sulfur atoms from cysteine to produce alanine. Functions as a sulfur delivery protein for Fe-S cluster synthesis onto IscU, an Fe-S scaffold assembly protein, as well as other S acceptor proteins; Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family. NifS/IscS subfamily.	HTH-type transcriptional regulator CymR.	0.954
iscS_1	iscU	CLOTH_05750	CLOTH_05740	Cysteine desulfurase IscS; Master enzyme that delivers sulfur to a number of partners involved in Fe-S cluster assembly, tRNA modification or cofactor biosynthesis. Catalyzes the removal of elemental sulfur atoms from cysteine to produce alanine. Functions as a sulfur delivery protein for Fe-S cluster synthesis onto IscU, an Fe-S scaffold assembly protein, as well as other S acceptor proteins; Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family. NifS/IscS subfamily.	Iron-sulfur cluster assembly scaffold protein IscU.	0.998
iscS_1	mnmA	CLOTH_05750	CLOTH_05730	Cysteine desulfurase IscS; Master enzyme that delivers sulfur to a number of partners involved in Fe-S cluster assembly, tRNA modification or cofactor biosynthesis. Catalyzes the removal of elemental sulfur atoms from cysteine to produce alanine. Functions as a sulfur delivery protein for Fe-S cluster synthesis onto IscU, an Fe-S scaffold assembly protein, as well as other S acceptor proteins; Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family. NifS/IscS subfamily.	tRNA-specific 2-thiouridylase MnmA; Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34.	0.787
iscS_2	cymR	CLOTH_16380	CLOTH_05760	Cysteine desulfurase IscS.	HTH-type transcriptional regulator CymR.	0.817
iscS_2	iscU	CLOTH_16380	CLOTH_05740	Cysteine desulfurase IscS.	Iron-sulfur cluster assembly scaffold protein IscU.	0.994