STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OPJ57307.1Hypothetical protein. (163 aa)    
Predicted Functional Partners:
spoIIIE
DNA translocase SpoIIIE; Belongs to the FtsK/SpoIIIE/SftA family.
    
 
 0.790
ftsK
DNA translocase FtsK; Belongs to the FtsK/SpoIIIE/SftA family.
    
 
 0.790
ctpB
Carboxy-terminal processing protease CtpB precursor; Belongs to the peptidase S41A family.
  
   0.782
epr
Minor extracellular protease Epr precursor.
  
 0.767
aprX
Serine protease AprX; Belongs to the peptidase S8 family.
  
 0.767
acpP_1
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.
   
 
 0.726
acpP_2
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.
   
 
 0.726
OPJ55889.1
Phage gp6-like head-tail connector protein.
  
 0.688
OPJ56385.1
Hypothetical protein.
  
 0.641
OPJ56231.1
Hypothetical protein.
  
 0.605
Your Current Organism:
Clostridium thermoalcaliphilum
NCBI taxonomy Id: 29349
Other names: ATCC 51508, CIP 105528, DSM 7309, [. thermoalcaliphilum, [Clostridium] thermoalcaliphilum, strain JW/YL23-2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.