Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
OPJ56198.1AIG2-like family protein. (152 aa)    
Predicted Functional Partners:
OPJ56197.1
Putative amidoligase enzyme.
 
    0.920
OPJ56199.1
Hypothetical protein.
 
    0.858
OPJ56196.1
Hypothetical protein.
 
    0.823
OPJ55900.1
Putative amidoligase enzyme.
 
    0.784
OPJ56195.1
Hypothetical protein.
 
    0.727
OPJ56219.1
Hypothetical protein.
 
    0.639
OPJ56200.1
Phage terminase.
       0.618
OPJ56206.1
Phage head-tail joining protein.
 
    0.599
OPJ56207.1
Hypothetical protein.
 
    0.598
OPJ56221.1
Hypothetical protein.
 
     0.587
Your Current Organism:
Clostridium thermoalcaliphilum
NCBI taxonomy Id: 29349
Other names: ATCC 51508, CIP 105528, DSM 7309, [. thermoalcaliphilum, [Clostridium] thermoalcaliphilum, strain JW/YL23-2
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