OPJ56200.1 protein (Clostridium thermoalcaliphilum)

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

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a 3D structure is known or predicted

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Knowledge-based Evidence

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textmining

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experimentally determined

co-expression

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gene neighborhood

gene co-occurrence

gene fusions

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[Homology]

Score

OPJ56200.1

Phage terminase. (544 aa)

Predicted Functional Partners:

OPJ56201.1

0.917

clpP1_1

0.903

OPJ56203.1

0.903

OPJ56191.1

0.881

OPJ55904.1

0.849

OPJ55893.1

0.794

OPJ56192.1

0.782

OPJ56195.1

0.724

OPJ55888.1

0.721

OPJ56199.1

0.718

Your Current Organism:

Clostridium thermoalcaliphilum

NCBI taxonomy Id: 29349
Other names: ATCC 51508, CIP 105528, DSM 7309, [. thermoalcaliphilum, [Clostridium] thermoalcaliphilum, strain JW/YL23-2

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structured XML interaction data, according to the 'PSI-MI' data standard

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
OPJ55888.1	OPJ55893.1	CLOTH_10660	CLOTH_10710	Phage head-tail joining protein.	Phage portal protein.	0.938
OPJ55888.1	OPJ55904.1	CLOTH_10660	CLOTH_10820	Phage head-tail joining protein.	HNH endonuclease.	0.766
OPJ55888.1	OPJ56191.1	CLOTH_10660	CLOTH_05950	Phage head-tail joining protein.	HNH endonuclease.	0.478
OPJ55888.1	OPJ56200.1	CLOTH_10660	CLOTH_06040	Phage head-tail joining protein.	Phage terminase.	0.721
OPJ55888.1	OPJ56201.1	CLOTH_10660	CLOTH_06050	Phage head-tail joining protein.	Phage portal protein.	0.687
OPJ55888.1	OPJ56203.1	CLOTH_10660	CLOTH_06070	Phage head-tail joining protein.	Phage capsid family protein.	0.593
OPJ55893.1	OPJ55888.1	CLOTH_10710	CLOTH_10660	Phage portal protein.	Phage head-tail joining protein.	0.938
OPJ55893.1	OPJ55904.1	CLOTH_10710	CLOTH_10820	Phage portal protein.	HNH endonuclease.	0.809
OPJ55893.1	OPJ56191.1	CLOTH_10710	CLOTH_05950	Phage portal protein.	HNH endonuclease.	0.733
OPJ55893.1	OPJ56200.1	CLOTH_10710	CLOTH_06040	Phage portal protein.	Phage terminase.	0.794
OPJ55893.1	OPJ56203.1	CLOTH_10710	CLOTH_06070	Phage portal protein.	Phage capsid family protein.	0.862
OPJ55893.1	clpP1_1	CLOTH_10710	CLOTH_06060	Phage portal protein.	ATP-dependent Clp protease proteolytic subunit 1; Belongs to the peptidase S14 family.	0.704
OPJ55904.1	OPJ55888.1	CLOTH_10820	CLOTH_10660	HNH endonuclease.	Phage head-tail joining protein.	0.766
OPJ55904.1	OPJ55893.1	CLOTH_10820	CLOTH_10710	HNH endonuclease.	Phage portal protein.	0.809
OPJ55904.1	OPJ56195.1	CLOTH_10820	CLOTH_05990	HNH endonuclease.	Hypothetical protein.	0.461
OPJ55904.1	OPJ56200.1	CLOTH_10820	CLOTH_06040	HNH endonuclease.	Phage terminase.	0.849
OPJ55904.1	OPJ56201.1	CLOTH_10820	CLOTH_06050	HNH endonuclease.	Phage portal protein.	0.779
OPJ55904.1	OPJ56203.1	CLOTH_10820	CLOTH_06070	HNH endonuclease.	Phage capsid family protein.	0.409
OPJ56191.1	OPJ55888.1	CLOTH_05950	CLOTH_10660	HNH endonuclease.	Phage head-tail joining protein.	0.478
OPJ56191.1	OPJ55893.1	CLOTH_05950	CLOTH_10710	HNH endonuclease.	Phage portal protein.	0.733