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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
msrAPeptide methionine sulfoxide reductase MsrA; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine. (183 aa)    
Predicted Functional Partners:
OPJ54937.1
Hypothetical protein.
   
 0.971
OPJ55820.1
Hypothetical protein.
   
 0.968
grxC
Glutaredoxin-3.
  
 
 0.918
polA_1
DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity.
  
  
 0.868
sgcG_2
2-amino-4-deoxychorismate dehydrogenase.
 
    0.711
thrZ_2
threonine--tRNA ligase 2.
      0.697
mcpA_1
Methyl-accepting chemotaxis protein McpA.
       0.686
flgK
Flagellar hook-associated protein 1.
    
   0.641
glpE
Thiosulfate sulfurtransferase GlpE.
 
   
 0.544
cdr
Coenzyme A disulfide reductase.
     
 0.486
Your Current Organism:
Clostridium thermoalcaliphilum
NCBI taxonomy Id: 29349
Other names: ATCC 51508, CIP 105528, DSM 7309, [. thermoalcaliphilum, [Clostridium] thermoalcaliphilum, strain JW/YL23-2
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