Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
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[Homology]
Score
fldCR-phenyllactate dehydratase beta subunit. (393 aa)    
Predicted Functional Partners:
fldI_3
R-phenyllactate dehydratase activator.
 0.994
fldI_2
R-phenyllactate dehydratase activator.
 0.954
fldI_1
R-phenyllactate dehydratase activator.
 0.879
OPJ55441.1
SirA-like protein; Belongs to the sulfur carrier protein TusA family.
 
    0.714
acdA
acyl-CoA dehydrogenase.
    
 0.671
ctfB
Butyrate--acetoacetate CoA-transferase subunit B.
    
  0.608
ctfA
Butyrate--acetoacetate CoA-transferase subunit A.
    
  0.551
OPJ56257.1
Protoporphyrinogen oxidase.
       0.486
OPJ56278.1
SirA-like protein; Belongs to the sulfur carrier protein TusA family.
 
    0.473
yeiL
Regulatory protein YeiL.
       0.408
Your Current Organism:
Clostridium thermoalcaliphilum
NCBI taxonomy Id: 29349
Other names: ATCC 51508, CIP 105528, DSM 7309, [. thermoalcaliphilum, [Clostridium] thermoalcaliphilum, strain JW/YL23-2
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