Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
cysWSulfate transport system permease protein CysW. (536 aa)    
Predicted Functional Partners:
futA1
Iron uptake protein A1 precursor.
 
 
 0.996
ugpC_1
Sn-glycerol-3-phosphate import ATP-binding protein UgpC; Belongs to the ABC transporter superfamily.
 
 0.988
potA
Spermidine/putrescine import ATP-binding protein PotA; Belongs to the ABC transporter superfamily.
 
 0.965
ugpC_2
Sn-glycerol-3-phosphate import ATP-binding protein UgpC; Belongs to the ABC transporter superfamily.
 
  
 0.739
OPJ56287.1
Putative DMT superfamily transporter inner membrane protein.
  
    0.513
dagK
Diacylglycerol kinase.
       0.493
OPJ55825.1
Nicotianamine synthase protein.
 
     0.491
OPJ57274.1
Hypothetical protein.
 
  
  0.474
phnV
Putative 2-aminoethylphosphonate transport system permease protein PhnV.
    
  0.439
cysA
Sulfate/thiosulfate import ATP-binding protein CysA.
    
  0.407
Your Current Organism:
Clostridium thermoalcaliphilum
NCBI taxonomy Id: 29349
Other names: ATCC 51508, CIP 105528, DSM 7309, [. thermoalcaliphilum, [Clostridium] thermoalcaliphilum, strain JW/YL23-2
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