Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ugpC_1Sn-glycerol-3-phosphate import ATP-binding protein UgpC; Belongs to the ABC transporter superfamily. (347 aa)    
Predicted Functional Partners:
cysW
Sulfate transport system permease protein CysW.
 
 0.988
phnV
Putative 2-aminoethylphosphonate transport system permease protein PhnV.
 
 0.967
cysT
Sulfate transport system permease protein CysT.
 
 0.962
futA1
Iron uptake protein A1 precursor.
 
 
 0.944
malF
Maltose transport system permease protein MalF.
 
  
 0.813
ecsA_2
ABC-type transporter ATP-binding protein EcsA.
 
  
 
0.763
OPJ55933.1
Putative multidrug export ATP-binding/permease protein.
 
    
0.691
lacF_1
Lactose transport system permease protein LacF.
 
  
 0.663
malG
Maltose transport system permease protein MalG.
  
  
  0.649
sugB
Trehalose transport system permease protein SugB.
  
  
 0.648
Your Current Organism:
Clostridium thermoalcaliphilum
NCBI taxonomy Id: 29349
Other names: ATCC 51508, CIP 105528, DSM 7309, [. thermoalcaliphilum, [Clostridium] thermoalcaliphilum, strain JW/YL23-2
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