Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| OPJ55948.1 | OPJ56309.1 | CLOTH_11260 | CLOTH_07130 | Cobalt-dependent inorganic pyrophosphatase. | Hypothetical protein; Putative metallophosphoesterase MG207 homolog. | 0.437 |
| OPJ55948.1 | guaA | CLOTH_11260 | CLOTH_11700 | Cobalt-dependent inorganic pyrophosphatase. | GMP synthase; Catalyzes the synthesis of GMP from XMP. | 0.985 |
| OPJ55948.1 | guaB | CLOTH_11260 | CLOTH_11710 | Cobalt-dependent inorganic pyrophosphatase. | Inosine-5'-monophosphate dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family. | 0.891 |
| OPJ55948.1 | racE | CLOTH_11260 | CLOTH_19310 | Cobalt-dependent inorganic pyrophosphatase. | Glutamate racemase 1; Provides the (R)-glutamate required for cell wall biosynthesis. | 0.536 |
| OPJ55948.1 | rph | CLOTH_11260 | CLOTH_07120 | Cobalt-dependent inorganic pyrophosphatase. | Ribonuclease PH; Phosphorolytic 3'-5' exoribonuclease that plays an important role in tRNA 3'-end maturation. Removes nucleotide residues following the 3'-CCA terminus of tRNAs; can also add nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates, but this may not be physiologically important. Probably plays a role in initiation of 16S rRNA degradation (leading to ribosome degradation) during starvation. | 0.944 |
| OPJ56309.1 | OPJ55948.1 | CLOTH_07130 | CLOTH_11260 | Hypothetical protein; Putative metallophosphoesterase MG207 homolog. | Cobalt-dependent inorganic pyrophosphatase. | 0.437 |
| OPJ56309.1 | rph | CLOTH_07130 | CLOTH_07120 | Hypothetical protein; Putative metallophosphoesterase MG207 homolog. | Ribonuclease PH; Phosphorolytic 3'-5' exoribonuclease that plays an important role in tRNA 3'-end maturation. Removes nucleotide residues following the 3'-CCA terminus of tRNAs; can also add nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates, but this may not be physiologically important. Probably plays a role in initiation of 16S rRNA degradation (leading to ribosome degradation) during starvation. | 0.966 |
| guaA | OPJ55948.1 | CLOTH_11700 | CLOTH_11260 | GMP synthase; Catalyzes the synthesis of GMP from XMP. | Cobalt-dependent inorganic pyrophosphatase. | 0.985 |
| guaA | guaB | CLOTH_11700 | CLOTH_11710 | GMP synthase; Catalyzes the synthesis of GMP from XMP. | Inosine-5'-monophosphate dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family. | 0.999 |
| guaA | racE | CLOTH_11700 | CLOTH_19310 | GMP synthase; Catalyzes the synthesis of GMP from XMP. | Glutamate racemase 1; Provides the (R)-glutamate required for cell wall biosynthesis. | 0.849 |
| guaA | rph | CLOTH_11700 | CLOTH_07120 | GMP synthase; Catalyzes the synthesis of GMP from XMP. | Ribonuclease PH; Phosphorolytic 3'-5' exoribonuclease that plays an important role in tRNA 3'-end maturation. Removes nucleotide residues following the 3'-CCA terminus of tRNAs; can also add nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates, but this may not be physiologically important. Probably plays a role in initiation of 16S rRNA degradation (leading to ribosome degradation) during starvation. | 0.985 |
| guaA | rpsD | CLOTH_11700 | CLOTH_18310 | GMP synthase; Catalyzes the synthesis of GMP from XMP. | 30S ribosomal protein S4; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit. | 0.845 |
| guaA | rpsE | CLOTH_11700 | CLOTH_18420 | GMP synthase; Catalyzes the synthesis of GMP from XMP. | 30S ribosomal protein S5; Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body. Belongs to the universal ribosomal protein uS5 family. | 0.782 |
| guaA | rpsK | CLOTH_11700 | CLOTH_18320 | GMP synthase; Catalyzes the synthesis of GMP from XMP. | 30S ribosomal protein S11; Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine- Dalgarno cleft in the 70S ribosome; Belongs to the universal ribosomal protein uS11 family. | 0.788 |
| guaA | yabJ | CLOTH_11700 | CLOTH_13280 | GMP synthase; Catalyzes the synthesis of GMP from XMP. | 2-iminobutanoate/2-iminopropanoate deaminase. | 0.648 |
| guaB | OPJ55948.1 | CLOTH_11710 | CLOTH_11260 | Inosine-5'-monophosphate dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family. | Cobalt-dependent inorganic pyrophosphatase. | 0.891 |
| guaB | guaA | CLOTH_11710 | CLOTH_11700 | Inosine-5'-monophosphate dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family. | GMP synthase; Catalyzes the synthesis of GMP from XMP. | 0.999 |
| guaB | racE | CLOTH_11710 | CLOTH_19310 | Inosine-5'-monophosphate dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family. | Glutamate racemase 1; Provides the (R)-glutamate required for cell wall biosynthesis. | 0.452 |
| guaB | rph | CLOTH_11710 | CLOTH_07120 | Inosine-5'-monophosphate dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family. | Ribonuclease PH; Phosphorolytic 3'-5' exoribonuclease that plays an important role in tRNA 3'-end maturation. Removes nucleotide residues following the 3'-CCA terminus of tRNAs; can also add nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates, but this may not be physiologically important. Probably plays a role in initiation of 16S rRNA degradation (leading to ribosome degradation) during starvation. | 0.949 |
| racE | OPJ55948.1 | CLOTH_19310 | CLOTH_11260 | Glutamate racemase 1; Provides the (R)-glutamate required for cell wall biosynthesis. | Cobalt-dependent inorganic pyrophosphatase. | 0.536 |
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