Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| OPJ56309.1 | OPJ56310.1 | CLOTH_07130 | CLOTH_07140 | Hypothetical protein; Putative metallophosphoesterase MG207 homolog. | Hypothetical protein. | 0.752 |
| OPJ56309.1 | amiC | CLOTH_07130 | CLOTH_07110 | Hypothetical protein; Putative metallophosphoesterase MG207 homolog. | N-acetylmuramoyl-L-alanine amidase AmiC precursor. | 0.617 |
| OPJ56309.1 | rph | CLOTH_07130 | CLOTH_07120 | Hypothetical protein; Putative metallophosphoesterase MG207 homolog. | Ribonuclease PH; Phosphorolytic 3'-5' exoribonuclease that plays an important role in tRNA 3'-end maturation. Removes nucleotide residues following the 3'-CCA terminus of tRNAs; can also add nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates, but this may not be physiologically important. Probably plays a role in initiation of 16S rRNA degradation (leading to ribosome degradation) during starvation. | 0.966 |
| OPJ56310.1 | OPJ56309.1 | CLOTH_07140 | CLOTH_07130 | Hypothetical protein. | Hypothetical protein; Putative metallophosphoesterase MG207 homolog. | 0.752 |
| OPJ56310.1 | amiC | CLOTH_07140 | CLOTH_07110 | Hypothetical protein. | N-acetylmuramoyl-L-alanine amidase AmiC precursor. | 0.541 |
| OPJ56310.1 | purL | CLOTH_07140 | CLOTH_11620 | Hypothetical protein. | Phosphoribosylformylglycinamidine synthase 2. | 0.414 |
| OPJ56310.1 | rph | CLOTH_07140 | CLOTH_07120 | Hypothetical protein. | Ribonuclease PH; Phosphorolytic 3'-5' exoribonuclease that plays an important role in tRNA 3'-end maturation. Removes nucleotide residues following the 3'-CCA terminus of tRNAs; can also add nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates, but this may not be physiologically important. Probably plays a role in initiation of 16S rRNA degradation (leading to ribosome degradation) during starvation. | 0.820 |
| amiC | OPJ56309.1 | CLOTH_07110 | CLOTH_07130 | N-acetylmuramoyl-L-alanine amidase AmiC precursor. | Hypothetical protein; Putative metallophosphoesterase MG207 homolog. | 0.617 |
| amiC | OPJ56310.1 | CLOTH_07110 | CLOTH_07140 | N-acetylmuramoyl-L-alanine amidase AmiC precursor. | Hypothetical protein. | 0.541 |
| amiC | rph | CLOTH_07110 | CLOTH_07120 | N-acetylmuramoyl-L-alanine amidase AmiC precursor. | Ribonuclease PH; Phosphorolytic 3'-5' exoribonuclease that plays an important role in tRNA 3'-end maturation. Removes nucleotide residues following the 3'-CCA terminus of tRNAs; can also add nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates, but this may not be physiologically important. Probably plays a role in initiation of 16S rRNA degradation (leading to ribosome degradation) during starvation. | 0.600 |
| purL | OPJ56310.1 | CLOTH_11620 | CLOTH_07140 | Phosphoribosylformylglycinamidine synthase 2. | Hypothetical protein. | 0.414 |
| purL | rph | CLOTH_11620 | CLOTH_07120 | Phosphoribosylformylglycinamidine synthase 2. | Ribonuclease PH; Phosphorolytic 3'-5' exoribonuclease that plays an important role in tRNA 3'-end maturation. Removes nucleotide residues following the 3'-CCA terminus of tRNAs; can also add nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates, but this may not be physiologically important. Probably plays a role in initiation of 16S rRNA degradation (leading to ribosome degradation) during starvation. | 0.619 |
| rph | OPJ56309.1 | CLOTH_07120 | CLOTH_07130 | Ribonuclease PH; Phosphorolytic 3'-5' exoribonuclease that plays an important role in tRNA 3'-end maturation. Removes nucleotide residues following the 3'-CCA terminus of tRNAs; can also add nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates, but this may not be physiologically important. Probably plays a role in initiation of 16S rRNA degradation (leading to ribosome degradation) during starvation. | Hypothetical protein; Putative metallophosphoesterase MG207 homolog. | 0.966 |
| rph | OPJ56310.1 | CLOTH_07120 | CLOTH_07140 | Ribonuclease PH; Phosphorolytic 3'-5' exoribonuclease that plays an important role in tRNA 3'-end maturation. Removes nucleotide residues following the 3'-CCA terminus of tRNAs; can also add nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates, but this may not be physiologically important. Probably plays a role in initiation of 16S rRNA degradation (leading to ribosome degradation) during starvation. | Hypothetical protein. | 0.820 |
| rph | amiC | CLOTH_07120 | CLOTH_07110 | Ribonuclease PH; Phosphorolytic 3'-5' exoribonuclease that plays an important role in tRNA 3'-end maturation. Removes nucleotide residues following the 3'-CCA terminus of tRNAs; can also add nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates, but this may not be physiologically important. Probably plays a role in initiation of 16S rRNA degradation (leading to ribosome degradation) during starvation. | N-acetylmuramoyl-L-alanine amidase AmiC precursor. | 0.600 |
| rph | purL | CLOTH_07120 | CLOTH_11620 | Ribonuclease PH; Phosphorolytic 3'-5' exoribonuclease that plays an important role in tRNA 3'-end maturation. Removes nucleotide residues following the 3'-CCA terminus of tRNAs; can also add nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates, but this may not be physiologically important. Probably plays a role in initiation of 16S rRNA degradation (leading to ribosome degradation) during starvation. | Phosphoribosylformylglycinamidine synthase 2. | 0.619 |