STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
gltPProton glutamate symport protein; Belongs to the dicarboxylate/amino acid:cation symporter (DAACS) (TC 2.A.23) family. (424 aa)    
Predicted Functional Partners:
spo0A_2
Stage 0 sporulation protein A.
  
    0.544
kinE
Sporulation kinase E.
     
 0.543
glnK
Sensor histidine kinase GlnK.
     
 0.542
glcB
PTS system glucoside-specific EIICBA component.
     
 0.537
ptsG
PTS system glucose-specific EIICBA component.
     
 0.537
znuC
High-affinity zinc uptake system ATP-binding protein ZnuC.
       0.509
rpfG_1
Cyclic di-GMP phosphodiesterase response regulator RpfG.
       0.507
znuB
High-affinity zinc uptake system membrane protein ZnuB.
       0.499
pepF1_1
Oligoendopeptidase F, plasmid.
       0.436
Your Current Organism:
Clostridium thermoalcaliphilum
NCBI taxonomy Id: 29349
Other names: ATCC 51508, CIP 105528, DSM 7309, [. thermoalcaliphilum, [Clostridium] thermoalcaliphilum, strain JW/YL23-2
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