Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
OPJ56384.1Metal-dependent hydrolase. (232 aa)    
Predicted Functional Partners:
gloA_1
Lactoylglutathione lyase.
 
    0.810
OPJ56383.1
Hypothetical protein.
       0.714
OPJ56385.1
Hypothetical protein.
  
    0.604
OPJ55588.1
Hypothetical protein.
  
     0.531
OPJ56382.1
NMT1/THI5 like protein.
  
    0.513
purL
Phosphoribosylformylglycinamidine synthase 2.
 
     0.472
fruA_1
PTS system fructose-specific EIIABC component.
    
 0.447
OPJ56739.1
Hypothetical protein.
   
    0.441
OPJ56386.1
Fusaric acid resistance protein family protein.
       0.436
ribBA
Riboflavin biosynthesis protein RibBA; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; In the C-terminal section; belongs to the GTP cyclohydrolase II family.
       0.435
Your Current Organism:
Clostridium thermoalcaliphilum
NCBI taxonomy Id: 29349
Other names: ATCC 51508, CIP 105528, DSM 7309, [. thermoalcaliphilum, [Clostridium] thermoalcaliphilum, strain JW/YL23-2
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