STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OPJ56396.1Hypothetical protein. (286 aa)    
Predicted Functional Partners:
pncC
Nicotinamide-nucleotide amidohydrolase PncC; Belongs to the CinA family.
  
 
 0.885
guaA
GMP synthase; Catalyzes the synthesis of GMP from XMP.
  
 
  0.876
OPJ55070.1
Hypothetical protein.
 
     0.732
rsxB_2
Electron transport complex subunit RsxB; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. Belongs to the 4Fe4S bacterial-type ferredoxin family. RnfB subfamily.
    
  0.725
OPJ55237.1
Hypothetical protein.
  
     0.723
OPJ56765.1
Hypothetical protein.
  
     0.673
glpE
Thiosulfate sulfurtransferase GlpE.
 
 
 0.665
OPJ54801.1
LysM domain protein.
  
     0.656
OPJ56941.1
Stage III sporulation protein SpoIIIAF.
  
     0.638
OPJ56395.1
TSCPD domain protein.
       0.626
Your Current Organism:
Clostridium thermoalcaliphilum
NCBI taxonomy Id: 29349
Other names: ATCC 51508, CIP 105528, DSM 7309, [. thermoalcaliphilum, [Clostridium] thermoalcaliphilum, strain JW/YL23-2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.