STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OPJ56397.1Hypothetical protein. (176 aa)    
Predicted Functional Partners:
ssbA_1
Single-stranded DNA-binding protein A.
 
     0.799
OPJ55424.1
Replication initiation and membrane attachment.
  
     0.762
dnaI
Primosomal protein DnaI.
  
     0.754
OPJ55365.1
Hypothetical protein.
  
     0.621
alkA_2
DNA-3-methyladenine glycosylase.
  
     0.612
dnaX_1
DNA polymerase III subunit tau.
  
    0.612
OPJ54801.1
LysM domain protein.
  
     0.580
OPJ55070.1
Hypothetical protein.
  
     0.561
OPJ56398.1
Small, acid-soluble spore protein beta.
       0.536
ndx1_1
Diadenosine hexaphosphate hydrolase.
  
     0.489
Your Current Organism:
Clostridium thermoalcaliphilum
NCBI taxonomy Id: 29349
Other names: ATCC 51508, CIP 105528, DSM 7309, [. thermoalcaliphilum, [Clostridium] thermoalcaliphilum, strain JW/YL23-2
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.