Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
OPJ56423.1CAAX amino terminal protease self- immunity. (290 aa)    
Predicted Functional Partners:
OPJ56422.1
N-acetyldiaminopimelate deacetylase.
       0.787
OPJ55256.1
Hypothetical protein.
  
     0.634
albA_1
Albonoursin synthase.
  
  
 0.614
OPJ57086.1
Flagellar assembly protein H.
  
     0.591
OPJ56794.1
ABC-2 family transporter protein.
   
  
 0.588
OPJ56795.1
ABC-2 family transporter protein.
   
  
 0.588
OPJ56046.1
FlgN protein.
  
     0.588
OPJ56055.1
FlgN protein.
  
     0.577
OPJ57089.1
Hypothetical protein.
  
     0.568
OPJ55257.1
Hypothetical protein.
  
     0.561
Your Current Organism:
Clostridium thermoalcaliphilum
NCBI taxonomy Id: 29349
Other names: ATCC 51508, CIP 105528, DSM 7309, [. thermoalcaliphilum, [Clostridium] thermoalcaliphilum, strain JW/YL23-2
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.