STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
citSCitrate-sodium symporter. (444 aa)    
Predicted Functional Partners:
citX
Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase.
 
   
 0.659
citD
Citrate lyase acyl carrier protein; Covalent carrier of the coenzyme of citrate lyase.
 
   
 0.631
OPJ55615.1
NAD-dependent malic enzyme.
  
  
 0.619
citF
Citrate lyase alpha chain.
 
   
 0.617
citC
[citrate [pro-3S]-lyase] ligase; Acetylation of prosthetic group (2-(5''-phosphoribosyl)-3'- dephosphocoenzyme-A) of the gamma subunit of citrate lyase.
 
   
 0.579
citE
Citrate lyase subunit beta; Belongs to the HpcH/HpaI aldolase family.
 
   
 0.560
cseB
Transcriptional regulatory protein CseB.
 
     0.547
OPJ56458.1
methylmalonyl-CoA carboxyltransferase 5S subunit.
       0.531
citG
2-(5''-triphosphoribosyl)-3'-dephosphocoenzyme-A synthase.
 
     0.445
glcB
PTS system glucoside-specific EIICBA component.
      
 0.426
Your Current Organism:
Clostridium thermoalcaliphilum
NCBI taxonomy Id: 29349
Other names: ATCC 51508, CIP 105528, DSM 7309, [. thermoalcaliphilum, [Clostridium] thermoalcaliphilum, strain JW/YL23-2
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