STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OPJ56468.1Hypothetical protein. (380 aa)    
Predicted Functional Partners:
OPJ56470.1
Branched-chain amino acid transport system / permease component; Belongs to the binding-protein-dependent transport system permease family.
 
 
 0.940
OPJ56471.1
Ribose ABC transporter permease protein; Belongs to the binding-protein-dependent transport system permease family.
 
 
 0.940
mglA_1
Galactose/methyl galactoside import ATP-binding protein MglA.
 
 
 0.927
glcB
PTS system glucoside-specific EIICBA component.
    
 0.797
ptsG
PTS system glucose-specific EIICBA component.
    
 0.797
pyk
Pyruvate kinase; Belongs to the pyruvate kinase family.
    
 
 0.710
ptsH
Phosphocarrier protein HPr.
   
 
 0.662
crh
HPr-like protein Crh.
   
 
 0.662
ldh
L-lactate dehydrogenase.
 
 
 
 0.600
guaA
GMP synthase; Catalyzes the synthesis of GMP from XMP.
    
   0.571
Your Current Organism:
Clostridium thermoalcaliphilum
NCBI taxonomy Id: 29349
Other names: ATCC 51508, CIP 105528, DSM 7309, [. thermoalcaliphilum, [Clostridium] thermoalcaliphilum, strain JW/YL23-2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.