Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
OPJ56470.1Branched-chain amino acid transport system / permease component; Belongs to the binding-protein-dependent transport system permease family. (346 aa)    
Predicted Functional Partners:
mglA_1
Galactose/methyl galactoside import ATP-binding protein MglA.
 
 0.988
OPJ56468.1
Hypothetical protein.
 
 
 0.951
OPJ56471.1
Ribose ABC transporter permease protein; Belongs to the binding-protein-dependent transport system permease family.
 
    
0.883
rbsB
D-ribose-binding periplasmic protein precursor.
  
 0.807
rbsA
Ribose import ATP-binding protein RbsA; Part of the ABC transporter complex RbsABC involved in ribose import. Responsible for energy coupling to the transport system. Belongs to the ABC transporter superfamily. Ribose importer (TC 3.A.1.2.1) family.
  
 0.750
rbsD
D-ribose pyranase; Catalyzes the interconversion of beta-pyran and beta-furan forms of D-ribose.
  
  
 0.683
corC
Magnesium and cobalt efflux protein CorC.
       0.480
cstA
Carbon starvation protein A.
   
    0.429
nadD_1
Nicotinate-nucleotide adenylyltransferase.
 
     0.408
Your Current Organism:
Clostridium thermoalcaliphilum
NCBI taxonomy Id: 29349
Other names: ATCC 51508, CIP 105528, DSM 7309, [. thermoalcaliphilum, [Clostridium] thermoalcaliphilum, strain JW/YL23-2
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.