Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
cheW_2Chemotaxis protein CheW. (149 aa)    
Predicted Functional Partners:
cheA
Chemotaxis protein CheA.
 
 0.996
cheB
Chemotaxis response regulator protein-glutamate methylesterase; Involved in chemotaxis. Part of a chemotaxis signal transduction system that modulates chemotaxis in response to various stimuli. Catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins or MCP) by CheR. Also mediates the irreversible deamidation of specific glutamine residues to glutamic acid. Belongs to the CheB family.
 
 
 0.984
fliN
Flagellar motor switch protein FliN.
  
 
 0.978
kinE
Sporulation kinase E.
  
 0.972
cheR
Chemotaxis protein methyltransferase.
 
 
 0.956
OPJ56036.1
Blue-light-activated protein.
  
 0.950
mcp1
Methyl-accepting chemotaxis protein 1.
 
  0.943
mcpB_1
Methyl-accepting chemotaxis protein McpB.
 
  0.933
mcpA_2
Methyl-accepting chemotaxis protein McpA.
 
  0.932
mcpC_2
Methyl-accepting chemotaxis protein McpC.
 
  0.932
Your Current Organism:
Clostridium thermoalcaliphilum
NCBI taxonomy Id: 29349
Other names: ATCC 51508, CIP 105528, DSM 7309, [. thermoalcaliphilum, [Clostridium] thermoalcaliphilum, strain JW/YL23-2
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