acrB protein (Clostridium thermoalcaliphilum)

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

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Experiments

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[Homology]

Score

acrB

acryloyl-CoA reductase electron transfer subunit gamma. (260 aa)

Predicted Functional Partners:

acrA

0.999

acdA

0.999

mmgB

0.862

gltD

0.857

hndC_1

0.855

hndC_2

0.855

thlA

0.852

echA8

0.820

trxB_3

0.818

hndA_1

0.747

Your Current Organism:

Clostridium thermoalcaliphilum

NCBI taxonomy Id: 29349
Other names: ATCC 51508, CIP 105528, DSM 7309, [. thermoalcaliphilum, [Clostridium] thermoalcaliphilum, strain JW/YL23-2

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
acdA	acrA	CLOTH_09370	CLOTH_09350	acyl-CoA dehydrogenase.	acryloyl-CoA reductase electron transfer subunit beta.	0.999
acdA	acrB	CLOTH_09370	CLOTH_09360	acyl-CoA dehydrogenase.	acryloyl-CoA reductase electron transfer subunit gamma.	0.999
acdA	echA8	CLOTH_09370	CLOTH_13040	acyl-CoA dehydrogenase.	Putative enoyl-CoA hydratase echA8; Belongs to the enoyl-CoA hydratase/isomerase family.	0.998
acdA	hndA_1	CLOTH_09370	CLOTH_04650	acyl-CoA dehydrogenase.	NADP-reducing hydrogenase subunit HndA.	0.960
acdA	hndC_1	CLOTH_09370	CLOTH_04660	acyl-CoA dehydrogenase.	NADP-reducing hydrogenase subunit HndC.	0.967
acdA	hndC_2	CLOTH_09370	CLOTH_07660	acyl-CoA dehydrogenase.	NADP-reducing hydrogenase subunit HndC.	0.967
acdA	mmgB	CLOTH_09370	CLOTH_13050	acyl-CoA dehydrogenase.	Putative 3-hydroxybutyryl-CoA dehydrogenase.	0.987
acdA	thlA	CLOTH_09370	CLOTH_09380	acyl-CoA dehydrogenase.	acetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family.	0.997
acrA	acdA	CLOTH_09350	CLOTH_09370	acryloyl-CoA reductase electron transfer subunit beta.	acyl-CoA dehydrogenase.	0.999
acrA	acrB	CLOTH_09350	CLOTH_09360	acryloyl-CoA reductase electron transfer subunit beta.	acryloyl-CoA reductase electron transfer subunit gamma.	0.999
acrA	echA8	CLOTH_09350	CLOTH_13040	acryloyl-CoA reductase electron transfer subunit beta.	Putative enoyl-CoA hydratase echA8; Belongs to the enoyl-CoA hydratase/isomerase family.	0.858
acrA	gltD	CLOTH_09350	CLOTH_06400	acryloyl-CoA reductase electron transfer subunit beta.	Glutamate synthase small chain.	0.657
acrA	hndA_1	CLOTH_09350	CLOTH_04650	acryloyl-CoA reductase electron transfer subunit beta.	NADP-reducing hydrogenase subunit HndA.	0.680
acrA	hndC_1	CLOTH_09350	CLOTH_04660	acryloyl-CoA reductase electron transfer subunit beta.	NADP-reducing hydrogenase subunit HndC.	0.660
acrA	hndC_2	CLOTH_09350	CLOTH_07660	acryloyl-CoA reductase electron transfer subunit beta.	NADP-reducing hydrogenase subunit HndC.	0.660
acrA	mmgB	CLOTH_09350	CLOTH_13050	acryloyl-CoA reductase electron transfer subunit beta.	Putative 3-hydroxybutyryl-CoA dehydrogenase.	0.799
acrA	thlA	CLOTH_09350	CLOTH_09380	acryloyl-CoA reductase electron transfer subunit beta.	acetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family.	0.880
acrA	trxB_3	CLOTH_09350	CLOTH_11960	acryloyl-CoA reductase electron transfer subunit beta.	Thioredoxin reductase.	0.589
acrB	acdA	CLOTH_09360	CLOTH_09370	acryloyl-CoA reductase electron transfer subunit gamma.	acyl-CoA dehydrogenase.	0.999
acrB	acrA	CLOTH_09360	CLOTH_09350	acryloyl-CoA reductase electron transfer subunit gamma.	acryloyl-CoA reductase electron transfer subunit beta.	0.999