Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
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[Homology]
Score
rbsC_2Ribose transport system permease protein RbsC; Belongs to the binding-protein-dependent transport system permease family. (312 aa)    
Predicted Functional Partners:
OPJ55769.1
Ribose ABC transporter permease protein; Belongs to the binding-protein-dependent transport system permease family.
 
0.999
mglA_2
Galactose/methyl galactoside import ATP-binding protein MglA.
 
 0.999
tmpC
Membrane lipoprotein TmpC precursor.
 
 
 0.992
mglA_1
Galactose/methyl galactoside import ATP-binding protein MglA.
 
  
 0.778
rbsA
Ribose import ATP-binding protein RbsA; Part of the ABC transporter complex RbsABC involved in ribose import. Responsible for energy coupling to the transport system. Belongs to the ABC transporter superfamily. Ribose importer (TC 3.A.1.2.1) family.
 
  
 0.697
OPJ55767.1
YtxC-like family protein.
       0.448
pdp
Pyrimidine-nucleoside phosphorylase.
     
 0.417
pncC
Nicotinamide-nucleotide amidohydrolase PncC; Belongs to the CinA family.
       0.410
Your Current Organism:
Clostridium thermoalcaliphilum
NCBI taxonomy Id: 29349
Other names: ATCC 51508, CIP 105528, DSM 7309, [. thermoalcaliphilum, [Clostridium] thermoalcaliphilum, strain JW/YL23-2
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