Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| OPJ55830.1 | OPJ55831.1 | CLOTH_10080 | CLOTH_10090 | Bacteriohemerythrin; Oxygen-binding protein. May be involved in a storage mechanism or for delivery to oxygen-requiring enzymes. The oxygen- binding site contains two iron atoms; Belongs to the hemerythrin family. | Putative Mg(2+) transport ATPase. | 0.518 |
| OPJ55830.1 | OPJ56036.1 | CLOTH_10080 | CLOTH_12140 | Bacteriohemerythrin; Oxygen-binding protein. May be involved in a storage mechanism or for delivery to oxygen-requiring enzymes. The oxygen- binding site contains two iron atoms; Belongs to the hemerythrin family. | Blue-light-activated protein. | 0.779 |
| OPJ55830.1 | cheA | CLOTH_10080 | CLOTH_03930 | Bacteriohemerythrin; Oxygen-binding protein. May be involved in a storage mechanism or for delivery to oxygen-requiring enzymes. The oxygen- binding site contains two iron atoms; Belongs to the hemerythrin family. | Chemotaxis protein CheA. | 0.495 |
| OPJ55830.1 | cheC | CLOTH_10080 | CLOTH_03950 | Bacteriohemerythrin; Oxygen-binding protein. May be involved in a storage mechanism or for delivery to oxygen-requiring enzymes. The oxygen- binding site contains two iron atoms; Belongs to the hemerythrin family. | CheY-P phosphatase CheC. | 0.493 |
| OPJ55830.1 | cheD | CLOTH_10080 | CLOTH_03960 | Bacteriohemerythrin; Oxygen-binding protein. May be involved in a storage mechanism or for delivery to oxygen-requiring enzymes. The oxygen- binding site contains two iron atoms; Belongs to the hemerythrin family. | Chemoreceptor glutamine deamidase CheD; Probably deamidates glutamine residues to glutamate on methyl-accepting chemotaxis receptors (MCPs), playing an important role in chemotaxis; Belongs to the CheD family. | 0.516 |
| OPJ55830.1 | fliM | CLOTH_10080 | CLOTH_03800 | Bacteriohemerythrin; Oxygen-binding protein. May be involved in a storage mechanism or for delivery to oxygen-requiring enzymes. The oxygen- binding site contains two iron atoms; Belongs to the hemerythrin family. | Flagellar motor switch protein FliM. | 0.542 |
| OPJ55830.1 | fprA1 | CLOTH_10080 | CLOTH_13060 | Bacteriohemerythrin; Oxygen-binding protein. May be involved in a storage mechanism or for delivery to oxygen-requiring enzymes. The oxygen- binding site contains two iron atoms; Belongs to the hemerythrin family. | Flavo-diiron protein FprA1. | 0.649 |
| OPJ55830.1 | gmr | CLOTH_10080 | CLOTH_17900 | Bacteriohemerythrin; Oxygen-binding protein. May be involved in a storage mechanism or for delivery to oxygen-requiring enzymes. The oxygen- binding site contains two iron atoms; Belongs to the hemerythrin family. | Cyclic di-GMP phosphodiesterase Gmr. | 0.748 |
| OPJ55830.1 | ydaM_1 | CLOTH_10080 | CLOTH_10170 | Bacteriohemerythrin; Oxygen-binding protein. May be involved in a storage mechanism or for delivery to oxygen-requiring enzymes. The oxygen- binding site contains two iron atoms; Belongs to the hemerythrin family. | Putative diguanylate cyclase YdaM. | 0.663 |
| OPJ55830.1 | ydaM_2 | CLOTH_10080 | CLOTH_14220 | Bacteriohemerythrin; Oxygen-binding protein. May be involved in a storage mechanism or for delivery to oxygen-requiring enzymes. The oxygen- binding site contains two iron atoms; Belongs to the hemerythrin family. | Putative diguanylate cyclase YdaM. | 0.586 |
| OPJ55831.1 | OPJ55830.1 | CLOTH_10090 | CLOTH_10080 | Putative Mg(2+) transport ATPase. | Bacteriohemerythrin; Oxygen-binding protein. May be involved in a storage mechanism or for delivery to oxygen-requiring enzymes. The oxygen- binding site contains two iron atoms; Belongs to the hemerythrin family. | 0.518 |
| OPJ56036.1 | OPJ55830.1 | CLOTH_12140 | CLOTH_10080 | Blue-light-activated protein. | Bacteriohemerythrin; Oxygen-binding protein. May be involved in a storage mechanism or for delivery to oxygen-requiring enzymes. The oxygen- binding site contains two iron atoms; Belongs to the hemerythrin family. | 0.779 |
| OPJ56036.1 | cheA | CLOTH_12140 | CLOTH_03930 | Blue-light-activated protein. | Chemotaxis protein CheA. | 0.992 |
| OPJ56036.1 | cheC | CLOTH_12140 | CLOTH_03950 | Blue-light-activated protein. | CheY-P phosphatase CheC. | 0.845 |
| OPJ56036.1 | cheD | CLOTH_12140 | CLOTH_03960 | Blue-light-activated protein. | Chemoreceptor glutamine deamidase CheD; Probably deamidates glutamine residues to glutamate on methyl-accepting chemotaxis receptors (MCPs), playing an important role in chemotaxis; Belongs to the CheD family. | 0.730 |
| OPJ56036.1 | fliM | CLOTH_12140 | CLOTH_03800 | Blue-light-activated protein. | Flagellar motor switch protein FliM. | 0.934 |
| OPJ56036.1 | gmr | CLOTH_12140 | CLOTH_17900 | Blue-light-activated protein. | Cyclic di-GMP phosphodiesterase Gmr. | 0.998 |
| OPJ56036.1 | ydaM_1 | CLOTH_12140 | CLOTH_10170 | Blue-light-activated protein. | Putative diguanylate cyclase YdaM. | 0.999 |
| OPJ56036.1 | ydaM_2 | CLOTH_12140 | CLOTH_14220 | Blue-light-activated protein. | Putative diguanylate cyclase YdaM. | 0.988 |
| cheA | OPJ55830.1 | CLOTH_03930 | CLOTH_10080 | Chemotaxis protein CheA. | Bacteriohemerythrin; Oxygen-binding protein. May be involved in a storage mechanism or for delivery to oxygen-requiring enzymes. The oxygen- binding site contains two iron atoms; Belongs to the hemerythrin family. | 0.495 |
page 1 of 4