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Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
Gene Fusion
Co-occurrence
Co-expression
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[Homology]
Score
OPJ55889.1Phage gp6-like head-tail connector protein. (190 aa)    
Predicted Functional Partners:
OPJ55888.1
Phage head-tail joining protein.
 
 
 0.988
OPJ55893.1
Phage portal protein.
 
 
 0.972
OPJ55891.1
Phage capsid family protein.
 
 
 0.961
OPJ55886.1
Hypothetical protein.
 
     0.953
OPJ55880.1
Prophage endopeptidase tail.
 
   0.945
OPJ55885.1
Hypothetical protein.
 
    0.915
OPJ55881.1
Phage tail protein.
 
   0.906
OPJ55894.1
Phage terminase.
 
     0.894
OPJ55895.1
Phage terminase, small subunit.
 
   
 0.885
OPJ55887.1
Hypothetical protein.
       0.842
Your Current Organism:
Clostridium thermoalcaliphilum
NCBI taxonomy Id: 29349
Other names: ATCC 51508, CIP 105528, DSM 7309, [. thermoalcaliphilum, [Clostridium] thermoalcaliphilum, strain JW/YL23-2
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