OPJ55904.1 protein (Clostridium thermoalcaliphilum)

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

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a 3D structure is known or predicted

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Knowledge-based Evidence

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textmining

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experimentally determined

co-expression

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gene neighborhood

gene co-occurrence

gene fusions

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[Homology]

Score

OPJ55904.1

HNH endonuclease. (126 aa)

Predicted Functional Partners:

OPJ55894.1

0.871

OPJ55895.1

0.861

OPJ56200.1

0.849

OPJ55893.1

0.809

OPJ56201.1

0.779

OPJ55906.1

0.777

OPJ55888.1

0.766

OPJ55891.1

0.747

OPJ55889.1

0.690

OPJ55903.1

0.677

Your Current Organism:

Clostridium thermoalcaliphilum

NCBI taxonomy Id: 29349
Other names: ATCC 51508, CIP 105528, DSM 7309, [. thermoalcaliphilum, [Clostridium] thermoalcaliphilum, strain JW/YL23-2

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structured XML interaction data, according to the 'PSI-MI' data standard

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... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
OPJ55888.1	OPJ55889.1	CLOTH_10660	CLOTH_10670	Phage head-tail joining protein.	Phage gp6-like head-tail connector protein.	0.988
OPJ55888.1	OPJ55891.1	CLOTH_10660	CLOTH_10690	Phage head-tail joining protein.	Phage capsid family protein.	0.956
OPJ55888.1	OPJ55893.1	CLOTH_10660	CLOTH_10710	Phage head-tail joining protein.	Phage portal protein.	0.938
OPJ55888.1	OPJ55894.1	CLOTH_10660	CLOTH_10720	Phage head-tail joining protein.	Phage terminase.	0.920
OPJ55888.1	OPJ55895.1	CLOTH_10660	CLOTH_10730	Phage head-tail joining protein.	Phage terminase, small subunit.	0.923
OPJ55888.1	OPJ55903.1	CLOTH_10660	CLOTH_10810	Phage head-tail joining protein.	Hypothetical protein.	0.744
OPJ55888.1	OPJ55904.1	CLOTH_10660	CLOTH_10820	Phage head-tail joining protein.	HNH endonuclease.	0.766
OPJ55888.1	OPJ56200.1	CLOTH_10660	CLOTH_06040	Phage head-tail joining protein.	Phage terminase.	0.721
OPJ55888.1	OPJ56201.1	CLOTH_10660	CLOTH_06050	Phage head-tail joining protein.	Phage portal protein.	0.687
OPJ55889.1	OPJ55888.1	CLOTH_10670	CLOTH_10660	Phage gp6-like head-tail connector protein.	Phage head-tail joining protein.	0.988
OPJ55889.1	OPJ55891.1	CLOTH_10670	CLOTH_10690	Phage gp6-like head-tail connector protein.	Phage capsid family protein.	0.961
OPJ55889.1	OPJ55893.1	CLOTH_10670	CLOTH_10710	Phage gp6-like head-tail connector protein.	Phage portal protein.	0.972
OPJ55889.1	OPJ55894.1	CLOTH_10670	CLOTH_10720	Phage gp6-like head-tail connector protein.	Phage terminase.	0.894
OPJ55889.1	OPJ55895.1	CLOTH_10670	CLOTH_10730	Phage gp6-like head-tail connector protein.	Phage terminase, small subunit.	0.885
OPJ55889.1	OPJ55903.1	CLOTH_10670	CLOTH_10810	Phage gp6-like head-tail connector protein.	Hypothetical protein.	0.742
OPJ55889.1	OPJ55904.1	CLOTH_10670	CLOTH_10820	Phage gp6-like head-tail connector protein.	HNH endonuclease.	0.690
OPJ55889.1	OPJ56201.1	CLOTH_10670	CLOTH_06050	Phage gp6-like head-tail connector protein.	Phage portal protein.	0.819
OPJ55891.1	OPJ55888.1	CLOTH_10690	CLOTH_10660	Phage capsid family protein.	Phage head-tail joining protein.	0.956
OPJ55891.1	OPJ55889.1	CLOTH_10690	CLOTH_10670	Phage capsid family protein.	Phage gp6-like head-tail connector protein.	0.961
OPJ55891.1	OPJ55893.1	CLOTH_10690	CLOTH_10710	Phage capsid family protein.	Phage portal protein.	0.957