STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OPJ55933.1Putative multidrug export ATP-binding/permease protein. (575 aa)    
Predicted Functional Partners:
drrA
Daunorubicin/doxorubicin resistance ATP-binding protein DrrA.
 
 
0.709
ugpC_1
Sn-glycerol-3-phosphate import ATP-binding protein UgpC; Belongs to the ABC transporter superfamily.
 
    
0.692
ytrB
ABC transporter ATP-binding protein YtrB.
  
0.652
OPJ55150.1
Fluoroquinolones export ATP-binding proteinc.
 
0.648
ecsA_1
ABC-type transporter ATP-binding protein EcsA.
  
0.645
ecsA_2
ABC-type transporter ATP-binding protein EcsA.
   
0.621
OPJ55444.1
Tetratricopeptide repeat protein.
    
 0.613
ecfA1
Energy-coupling factor transporter ATP-binding protein EcfA1; ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates.
   
 
0.608
glpK
Glycerol kinase; Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate.
   
 0.583
OPJ55932.1
Hypothetical protein.
       0.554
Your Current Organism:
Clostridium thermoalcaliphilum
NCBI taxonomy Id: 29349
Other names: ATCC 51508, CIP 105528, DSM 7309, [. thermoalcaliphilum, [Clostridium] thermoalcaliphilum, strain JW/YL23-2
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