STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
flrFlavoredoxin. (169 aa)    
Predicted Functional Partners:
OPJ55952.1
Patatin-like phospholipase.
       0.776
pcrA
ATP-dependent DNA helicase PcrA.
       0.741
albA_1
Albonoursin synthase.
 
 
 0.702
nifJ
Pyruvate-flavodoxin oxidoreductase.
    
 0.632
ribBA
Riboflavin biosynthesis protein RibBA; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; In the C-terminal section; belongs to the GTP cyclohydrolase II family.
  
  
 0.626
gltD
Glutamate synthase small chain.
  
  
 0.569
gloA_1
Lactoylglutathione lyase.
  
 
 0.546
acdA
acyl-CoA dehydrogenase.
  
 
 0.532
OPJ55954.1
Hypothetical protein.
       0.521
pyrK_2
Dihydroorotate dehydrogenase B, electron transfer subunit.
 
 
  0.511
Your Current Organism:
Clostridium thermoalcaliphilum
NCBI taxonomy Id: 29349
Other names: ATCC 51508, CIP 105528, DSM 7309, [. thermoalcaliphilum, [Clostridium] thermoalcaliphilum, strain JW/YL23-2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.