Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
OPJ55952.1Patatin-like phospholipase. (258 aa)    
Predicted Functional Partners:
flr
Flavoredoxin.
       0.778
pcrA
ATP-dependent DNA helicase PcrA.
       0.757
OPJ55940.1
Hypothetical protein.
  
     0.533
OPJ55954.1
Hypothetical protein.
       0.524
OPJ55424.1
Replication initiation and membrane attachment.
  
     0.518
OPJ56323.1
Hypothetical protein.
  
     0.515
OPJ55169.1
Hypothetical protein.
  
     0.511
OPJ55950.1
Hypothetical protein.
       0.503
OPJ56738.1
Hypothetical protein; Conserved virulence factor C.
  
     0.502
OPJ55838.1
Hypothetical protein.
  
     0.493
Your Current Organism:
Clostridium thermoalcaliphilum
NCBI taxonomy Id: 29349
Other names: ATCC 51508, CIP 105528, DSM 7309, [. thermoalcaliphilum, [Clostridium] thermoalcaliphilum, strain JW/YL23-2
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