STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OPJ55960.1Leucine/isoleucine/valine transporter permease subunit; Belongs to the binding-protein-dependent transport system permease family. (293 aa)    
Predicted Functional Partners:
livF
High-affinity branched-chain amino acid transport ATP-binding protein LivF.
 
 0.999
lptB
Lipopolysaccharide export system ATP-binding protein LptB.
 
 0.999
livH
High-affinity branched-chain amino acid transport system permease protein LivH; Belongs to the binding-protein-dependent transport system permease family.
 
0.999
braC
Leucine-, isoleucine-, valine-, threonine-, and alanine-binding protein precursor.
 
 
 0.998
OPJ56209.1
Hypothetical protein.
    
   0.694
OPJ56429.1
Chlorophenol reductase precursor.
    
   0.694
OPJ55885.1
Hypothetical protein.
    
   0.694
rbsA
Ribose import ATP-binding protein RbsA; Part of the ABC transporter complex RbsABC involved in ribose import. Responsible for energy coupling to the transport system. Belongs to the ABC transporter superfamily. Ribose importer (TC 3.A.1.2.1) family.
   
 0.540
drrA
Daunorubicin/doxorubicin resistance ATP-binding protein DrrA.
   
  0.439
artM
Arginine transport ATP-binding protein ArtM.
 
    
 0.416
Your Current Organism:
Clostridium thermoalcaliphilum
NCBI taxonomy Id: 29349
Other names: ATCC 51508, CIP 105528, DSM 7309, [. thermoalcaliphilum, [Clostridium] thermoalcaliphilum, strain JW/YL23-2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.