Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| OPJ56036.1 | kinE | CLOTH_12140 | CLOTH_12130 | Blue-light-activated protein. | Sporulation kinase E. | 0.999 |
| OPJ56036.1 | mshD | CLOTH_12140 | CLOTH_12080 | Blue-light-activated protein. | Mycothiol acetyltransferase; Acetylates the N-terminal alanine of ribosomal protein S18. | 0.683 |
| OPJ56036.1 | pyrC_2 | CLOTH_12140 | CLOTH_12120 | Blue-light-activated protein. | Dihydroorotase. | 0.784 |
| OPJ56036.1 | ribU | CLOTH_12140 | CLOTH_12110 | Blue-light-activated protein. | Riboflavin transporter RibU; Mediates riboflavin uptake, may also transport FMN and roseoflavin. Probably a riboflavin-binding protein that interacts with the energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates. The substrates themselves are bound by transmembrane, not extracytoplasmic soluble proteins; Belongs to the prokaryotic riboflavin transporter (P-RFT) (TC 2.A.87) family. | 0.717 |
| OPJ56036.1 | rpsA | CLOTH_12140 | CLOTH_12150 | Blue-light-activated protein. | 30S ribosomal protein S1. | 0.775 |
| OPJ56036.1 | tsaB | CLOTH_12140 | CLOTH_12090 | Blue-light-activated protein. | tRNA threonylcarbamoyladenosine biosynthesis protein TsaB. | 0.535 |
| OPJ56036.1 | tsaD_2 | CLOTH_12140 | CLOTH_12070 | Blue-light-activated protein. | tRNA N6-adenosine threonylcarbamoyltransferase; Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction; Belongs to the KAE1 / TsaD family. | 0.497 |
| OPJ56036.1 | tsaE | CLOTH_12140 | CLOTH_12100 | Blue-light-activated protein. | tRNA threonylcarbamoyladenosine biosynthesis protein TsaE. | 0.543 |
| kinE | OPJ56036.1 | CLOTH_12130 | CLOTH_12140 | Sporulation kinase E. | Blue-light-activated protein. | 0.999 |
| kinE | mshD | CLOTH_12130 | CLOTH_12080 | Sporulation kinase E. | Mycothiol acetyltransferase; Acetylates the N-terminal alanine of ribosomal protein S18. | 0.656 |
| kinE | pyrC_2 | CLOTH_12130 | CLOTH_12120 | Sporulation kinase E. | Dihydroorotase. | 0.780 |
| kinE | ribU | CLOTH_12130 | CLOTH_12110 | Sporulation kinase E. | Riboflavin transporter RibU; Mediates riboflavin uptake, may also transport FMN and roseoflavin. Probably a riboflavin-binding protein that interacts with the energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates. The substrates themselves are bound by transmembrane, not extracytoplasmic soluble proteins; Belongs to the prokaryotic riboflavin transporter (P-RFT) (TC 2.A.87) family. | 0.723 |
| kinE | rpsA | CLOTH_12130 | CLOTH_12150 | Sporulation kinase E. | 30S ribosomal protein S1. | 0.784 |
| kinE | tsaB | CLOTH_12130 | CLOTH_12090 | Sporulation kinase E. | tRNA threonylcarbamoyladenosine biosynthesis protein TsaB. | 0.514 |
| kinE | tsaD_2 | CLOTH_12130 | CLOTH_12070 | Sporulation kinase E. | tRNA N6-adenosine threonylcarbamoyltransferase; Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction; Belongs to the KAE1 / TsaD family. | 0.506 |
| kinE | tsaE | CLOTH_12130 | CLOTH_12100 | Sporulation kinase E. | tRNA threonylcarbamoyladenosine biosynthesis protein TsaE. | 0.675 |
| mshD | OPJ56036.1 | CLOTH_12080 | CLOTH_12140 | Mycothiol acetyltransferase; Acetylates the N-terminal alanine of ribosomal protein S18. | Blue-light-activated protein. | 0.683 |
| mshD | kinE | CLOTH_12080 | CLOTH_12130 | Mycothiol acetyltransferase; Acetylates the N-terminal alanine of ribosomal protein S18. | Sporulation kinase E. | 0.656 |
| mshD | pyrC_2 | CLOTH_12080 | CLOTH_12120 | Mycothiol acetyltransferase; Acetylates the N-terminal alanine of ribosomal protein S18. | Dihydroorotase. | 0.598 |
| mshD | ribU | CLOTH_12080 | CLOTH_12110 | Mycothiol acetyltransferase; Acetylates the N-terminal alanine of ribosomal protein S18. | Riboflavin transporter RibU; Mediates riboflavin uptake, may also transport FMN and roseoflavin. Probably a riboflavin-binding protein that interacts with the energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates. The substrates themselves are bound by transmembrane, not extracytoplasmic soluble proteins; Belongs to the prokaryotic riboflavin transporter (P-RFT) (TC 2.A.87) family. | 0.623 |
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