Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
OPJ56041.1Hypothetical protein. (909 aa)    
Predicted Functional Partners:
OPJ56038.1
Flagellar protein FliS.
 
     0.888
kinE
Sporulation kinase E.
 
 
 0.870
OPJ56042.1
Hypothetical protein.
 
     0.843
OPJ56040.1
Hypothetical protein.
       0.773
OPJ55443.1
Hypothetical protein.
  
     0.771
OPJ57089.1
Hypothetical protein.
  
     0.770
OPJ55639.1
Hypothetical protein.
  
     0.759
prxU
Selenocysteine-containing peroxiredoxin PrxU; Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides.
    
 
 0.757
OPJ55167.1
Hypothetical protein.
  
     0.757
OPJ56036.1
Blue-light-activated protein.
 
 
 0.746
Your Current Organism:
Clostridium thermoalcaliphilum
NCBI taxonomy Id: 29349
Other names: ATCC 51508, CIP 105528, DSM 7309, [. thermoalcaliphilum, [Clostridium] thermoalcaliphilum, strain JW/YL23-2
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.