STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ctfAButyrate--acetoacetate CoA-transferase subunit A. (217 aa)    
Predicted Functional Partners:
ctfB
Butyrate--acetoacetate CoA-transferase subunit B.
 0.999
kce
3-keto-5-aminohexanoate cleavage enzyme.
 
  
 0.951
adhE
Aldehyde-alcohol dehydrogenase; In the C-terminal section; belongs to the iron-containing alcohol dehydrogenase family.
  
 
 0.941
thlA
acetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family.
  
 
 0.936
buk2_2
Butyrate kinase 2; Belongs to the acetokinase family.
     
 0.895
mmgB
Putative 3-hydroxybutyryl-CoA dehydrogenase.
  
 
 0.894
acdA
acyl-CoA dehydrogenase.
  
 
 0.892
pta_2
Phosphate acetyltransferase.
   
 
 0.873
echA8
Putative enoyl-CoA hydratase echA8; Belongs to the enoyl-CoA hydratase/isomerase family.
  
 
 0.870
kal
3-aminobutyryl-CoA ammonia lyase.
       0.804
Your Current Organism:
Clostridium thermoalcaliphilum
NCBI taxonomy Id: 29349
Other names: ATCC 51508, CIP 105528, DSM 7309, [. thermoalcaliphilum, [Clostridium] thermoalcaliphilum, strain JW/YL23-2
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