Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
mmgBPutative 3-hydroxybutyryl-CoA dehydrogenase. (280 aa)    
Predicted Functional Partners:
thlA
acetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family.
 0.999
echA8
Putative enoyl-CoA hydratase echA8; Belongs to the enoyl-CoA hydratase/isomerase family.
 0.999
acdA
acyl-CoA dehydrogenase.
 0.987
ctfA
Butyrate--acetoacetate CoA-transferase subunit A.
  
 
 0.950
ctfB
Butyrate--acetoacetate CoA-transferase subunit B.
  
 
 0.949
acrA
acryloyl-CoA reductase electron transfer subunit beta.
  
 0.897
kdd
L-erythro-3,5-diaminohexanoate dehydrogenase.
  
 
 0.859
acrB
acryloyl-CoA reductase electron transfer subunit gamma.
  
 
 0.850
accB
Biotin carboxyl carrier protein of acetyl-CoA carboxylase; This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA.
    
 0.829
kal
3-aminobutyryl-CoA ammonia lyase.
  
 
 0.811
Your Current Organism:
Clostridium thermoalcaliphilum
NCBI taxonomy Id: 29349
Other names: ATCC 51508, CIP 105528, DSM 7309, [. thermoalcaliphilum, [Clostridium] thermoalcaliphilum, strain JW/YL23-2
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