STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rngRibonuclease G. (467 aa)    
Predicted Functional Partners:
pnp
Polyribonucleotide nucleotidyltransferase; Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'- direction.
  
 
 0.919
OPJ54982.1
glmZ(sRNA)-inactivating NTPase; Displays ATPase and GTPase activities.
 
 
 
 0.873
eno
Enolase; Catalyzes the reversible conversion of 2-phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis; Belongs to the enolase family.
    
 
 0.868
OPJ55551.1
Hypothetical protein.
       0.849
OPJ55550.1
Radical SAM superfamily protein.
       0.834
cshA_1
DEAD-box ATP-dependent RNA helicase CshA.
    
 
 0.819
cshA_2
DEAD-box ATP-dependent RNA helicase CshA; Belongs to the DEAD box helicase family.
    
 
 0.819
OPJ55452.1
R3H domain protein.
   
   0.806
OPJ55633.1
Hypothetical protein; Transcription termination/antitermination protein NusA; Belongs to the UPF0109 family.
    
   0.798
OPJ55549.1
Hypothetical protein.
       0.759
Your Current Organism:
Clostridium thermoalcaliphilum
NCBI taxonomy Id: 29349
Other names: ATCC 51508, CIP 105528, DSM 7309, [. thermoalcaliphilum, [Clostridium] thermoalcaliphilum, strain JW/YL23-2
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