Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| OPJ54739.1 | OPJ55610.1 | CLOTH_19600 | CLOTH_13690 | Type III restriction enzyme, res subunit. | HIT-like protein. | 0.828 |
| OPJ54739.1 | rpoB | CLOTH_19600 | CLOTH_18670 | Type III restriction enzyme, res subunit. | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.993 |
| OPJ54739.1 | rpoC | CLOTH_19600 | CLOTH_18660 | Type III restriction enzyme, res subunit. | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.963 |
| OPJ54739.1 | rpoZ | CLOTH_19600 | CLOTH_01840 | Type III restriction enzyme, res subunit. | DNA-directed RNA polymerase subunit omega; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits. | 0.993 |
| OPJ55610.1 | OPJ54739.1 | CLOTH_13690 | CLOTH_19600 | HIT-like protein. | Type III restriction enzyme, res subunit. | 0.828 |
| OPJ55610.1 | OPJ55612.1 | CLOTH_13690 | CLOTH_13710 | HIT-like protein. | glutamyl-tRNA(Gln) amidotransferase subunit E. | 0.577 |
| OPJ55610.1 | cshA_1 | CLOTH_13690 | CLOTH_02980 | HIT-like protein. | DEAD-box ATP-dependent RNA helicase CshA. | 0.565 |
| OPJ55610.1 | mtaB | CLOTH_13690 | CLOTH_13680 | HIT-like protein. | Threonylcarbamoyladenosine tRNA methylthiotransferase MtaB. | 0.741 |
| OPJ55610.1 | prmA | CLOTH_13690 | CLOTH_13660 | HIT-like protein. | Ribosomal protein L11 methyltransferase; Methylates ribosomal protein L11; Belongs to the methyltransferase superfamily. PrmA family. | 0.717 |
| OPJ55610.1 | rpoB | CLOTH_13690 | CLOTH_18670 | HIT-like protein. | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.746 |
| OPJ55610.1 | rpoC | CLOTH_13690 | CLOTH_18660 | HIT-like protein. | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.789 |
| OPJ55610.1 | rpoZ | CLOTH_13690 | CLOTH_01840 | HIT-like protein. | DNA-directed RNA polymerase subunit omega; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits. | 0.746 |
| OPJ55610.1 | rpsU | CLOTH_13690 | CLOTH_13700 | HIT-like protein. | 30S ribosomal protein S21; Belongs to the bacterial ribosomal protein bS21 family. | 0.604 |
| OPJ55610.1 | rsmE | CLOTH_13690 | CLOTH_13670 | HIT-like protein. | Ribosomal RNA small subunit methyltransferase E; Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit. | 0.717 |
| OPJ55612.1 | OPJ55610.1 | CLOTH_13710 | CLOTH_13690 | glutamyl-tRNA(Gln) amidotransferase subunit E. | HIT-like protein. | 0.577 |
| OPJ55612.1 | mtaB | CLOTH_13710 | CLOTH_13680 | glutamyl-tRNA(Gln) amidotransferase subunit E. | Threonylcarbamoyladenosine tRNA methylthiotransferase MtaB. | 0.527 |
| OPJ55612.1 | prmA | CLOTH_13710 | CLOTH_13660 | glutamyl-tRNA(Gln) amidotransferase subunit E. | Ribosomal protein L11 methyltransferase; Methylates ribosomal protein L11; Belongs to the methyltransferase superfamily. PrmA family. | 0.585 |
| OPJ55612.1 | rpsU | CLOTH_13710 | CLOTH_13700 | glutamyl-tRNA(Gln) amidotransferase subunit E. | 30S ribosomal protein S21; Belongs to the bacterial ribosomal protein bS21 family. | 0.970 |
| OPJ55612.1 | rsmE | CLOTH_13710 | CLOTH_13670 | glutamyl-tRNA(Gln) amidotransferase subunit E. | Ribosomal RNA small subunit methyltransferase E; Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit. | 0.544 |
| cshA_1 | OPJ55610.1 | CLOTH_02980 | CLOTH_13690 | DEAD-box ATP-dependent RNA helicase CshA. | HIT-like protein. | 0.565 |
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