Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| OPJ55615.1 | cfiB | CLOTH_13740 | CLOTH_05770 | NAD-dependent malic enzyme. | 2-oxoglutarate carboxylase small subunit; Catalyzes a 2-step reaction, involving the ATP-dependent carboxylation of the covalently attached biotin in the first step and the transfer of the carboxyl group to pyruvate in the second. | 0.955 |
| OPJ55615.1 | fumB | CLOTH_13740 | CLOTH_13730 | NAD-dependent malic enzyme. | Fumarate hydratase class I, anaerobic. | 0.995 |
| OPJ55615.1 | hndA_1 | CLOTH_13740 | CLOTH_04650 | NAD-dependent malic enzyme. | NADP-reducing hydrogenase subunit HndA. | 0.943 |
| OPJ55615.1 | korA_2 | CLOTH_13740 | CLOTH_20270 | NAD-dependent malic enzyme. | 2-oxoglutarate oxidoreductase subunit KorA. | 0.897 |
| OPJ55615.1 | korB_2 | CLOTH_13740 | CLOTH_20280 | NAD-dependent malic enzyme. | 2-oxoglutarate oxidoreductase subunit KorB. | 0.897 |
| OPJ55615.1 | nifJ | CLOTH_13740 | CLOTH_01250 | NAD-dependent malic enzyme. | Pyruvate-flavodoxin oxidoreductase. | 0.967 |
| OPJ55615.1 | pflB | CLOTH_13740 | CLOTH_16340 | NAD-dependent malic enzyme. | Formate acetyltransferase. | 0.915 |
| OPJ55615.1 | ppdK | CLOTH_13740 | CLOTH_02870 | NAD-dependent malic enzyme. | Pyruvate, phosphate dikinase. | 0.916 |
| OPJ55615.1 | pyk | CLOTH_13740 | CLOTH_18010 | NAD-dependent malic enzyme. | Pyruvate kinase; Belongs to the pyruvate kinase family. | 0.984 |
| OPJ55615.1 | ttdA | CLOTH_13740 | CLOTH_13720 | NAD-dependent malic enzyme. | L(+)-tartrate dehydratase subunit alpha. | 0.980 |
| cfiB | OPJ55615.1 | CLOTH_05770 | CLOTH_13740 | 2-oxoglutarate carboxylase small subunit; Catalyzes a 2-step reaction, involving the ATP-dependent carboxylation of the covalently attached biotin in the first step and the transfer of the carboxyl group to pyruvate in the second. | NAD-dependent malic enzyme. | 0.955 |
| cfiB | fumB | CLOTH_05770 | CLOTH_13730 | 2-oxoglutarate carboxylase small subunit; Catalyzes a 2-step reaction, involving the ATP-dependent carboxylation of the covalently attached biotin in the first step and the transfer of the carboxyl group to pyruvate in the second. | Fumarate hydratase class I, anaerobic. | 0.658 |
| cfiB | hndA_1 | CLOTH_05770 | CLOTH_04650 | 2-oxoglutarate carboxylase small subunit; Catalyzes a 2-step reaction, involving the ATP-dependent carboxylation of the covalently attached biotin in the first step and the transfer of the carboxyl group to pyruvate in the second. | NADP-reducing hydrogenase subunit HndA. | 0.901 |
| cfiB | korA_2 | CLOTH_05770 | CLOTH_20270 | 2-oxoglutarate carboxylase small subunit; Catalyzes a 2-step reaction, involving the ATP-dependent carboxylation of the covalently attached biotin in the first step and the transfer of the carboxyl group to pyruvate in the second. | 2-oxoglutarate oxidoreductase subunit KorA. | 0.899 |
| cfiB | korB_2 | CLOTH_05770 | CLOTH_20280 | 2-oxoglutarate carboxylase small subunit; Catalyzes a 2-step reaction, involving the ATP-dependent carboxylation of the covalently attached biotin in the first step and the transfer of the carboxyl group to pyruvate in the second. | 2-oxoglutarate oxidoreductase subunit KorB. | 0.899 |
| cfiB | nifJ | CLOTH_05770 | CLOTH_01250 | 2-oxoglutarate carboxylase small subunit; Catalyzes a 2-step reaction, involving the ATP-dependent carboxylation of the covalently attached biotin in the first step and the transfer of the carboxyl group to pyruvate in the second. | Pyruvate-flavodoxin oxidoreductase. | 0.965 |
| cfiB | pflB | CLOTH_05770 | CLOTH_16340 | 2-oxoglutarate carboxylase small subunit; Catalyzes a 2-step reaction, involving the ATP-dependent carboxylation of the covalently attached biotin in the first step and the transfer of the carboxyl group to pyruvate in the second. | Formate acetyltransferase. | 0.892 |
| cfiB | ppdK | CLOTH_05770 | CLOTH_02870 | 2-oxoglutarate carboxylase small subunit; Catalyzes a 2-step reaction, involving the ATP-dependent carboxylation of the covalently attached biotin in the first step and the transfer of the carboxyl group to pyruvate in the second. | Pyruvate, phosphate dikinase. | 0.940 |
| cfiB | pyk | CLOTH_05770 | CLOTH_18010 | 2-oxoglutarate carboxylase small subunit; Catalyzes a 2-step reaction, involving the ATP-dependent carboxylation of the covalently attached biotin in the first step and the transfer of the carboxyl group to pyruvate in the second. | Pyruvate kinase; Belongs to the pyruvate kinase family. | 0.962 |
| cfiB | ttdA | CLOTH_05770 | CLOTH_13720 | 2-oxoglutarate carboxylase small subunit; Catalyzes a 2-step reaction, involving the ATP-dependent carboxylation of the covalently attached biotin in the first step and the transfer of the carboxyl group to pyruvate in the second. | L(+)-tartrate dehydratase subunit alpha. | 0.657 |
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