OPJ55365.1 protein (Clostridium thermoalcaliphilum)

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Score

OPJ55365.1

Hypothetical protein. (165 aa)

Predicted Functional Partners:

secY

0.855

secE

0.842

OPJ56437.1

0.837

polA_1

0.734

rplW

0.699

rpmC

0.698

OPJ55366.1

0.690

OPJ56397.1

0.621

nifJ

0.558

ctc

0.551

Your Current Organism:

Clostridium thermoalcaliphilum

NCBI taxonomy Id: 29349
Other names: ATCC 51508, CIP 105528, DSM 7309, [. thermoalcaliphilum, [Clostridium] thermoalcaliphilum, strain JW/YL23-2

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
OPJ55365.1	OPJ55366.1	CLOTH_14230	CLOTH_14240	Hypothetical protein.	Hypothetical protein.	0.690
OPJ55365.1	OPJ56397.1	CLOTH_14230	CLOTH_08010	Hypothetical protein.	Hypothetical protein.	0.621
OPJ55365.1	OPJ56437.1	CLOTH_14230	CLOTH_08410	Hypothetical protein.	Preprotein translocase subunit SecG; Involved in protein export. Participates in an early event of protein translocation; Belongs to the SecG family.	0.837
OPJ55365.1	ctc	CLOTH_14230	CLOTH_20450	Hypothetical protein.	General stress protein CTC; This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance. Belongs to the bacterial ribosomal protein bL25 family. CTC subfamily.	0.551
OPJ55365.1	nifJ	CLOTH_14230	CLOTH_01250	Hypothetical protein.	Pyruvate-flavodoxin oxidoreductase.	0.558
OPJ55365.1	polA_1	CLOTH_14230	CLOTH_12690	Hypothetical protein.	DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity.	0.734
OPJ55365.1	rplW	CLOTH_14230	CLOTH_18570	Hypothetical protein.	50S ribosomal protein L23; One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome; Belongs to the universal ribosomal protein uL23 family.	0.699
OPJ55365.1	rpmC	CLOTH_14230	CLOTH_18510	Hypothetical protein.	50S ribosomal protein L29; Belongs to the universal ribosomal protein uL29 family.	0.698
OPJ55365.1	secE	CLOTH_14230	CLOTH_18730	Hypothetical protein.	Protein translocase subunit SecE; Essential subunit of the Sec protein translocation channel SecYEG. Clamps together the 2 halves of SecY. May contact the channel plug during translocation.	0.842
OPJ55365.1	secY	CLOTH_14230	CLOTH_18390	Hypothetical protein.	Protein translocase subunit SecY; The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently.	0.855
OPJ55366.1	OPJ55365.1	CLOTH_14240	CLOTH_14230	Hypothetical protein.	Hypothetical protein.	0.690
OPJ56397.1	OPJ55365.1	CLOTH_08010	CLOTH_14230	Hypothetical protein.	Hypothetical protein.	0.621
OPJ56437.1	OPJ55365.1	CLOTH_08410	CLOTH_14230	Preprotein translocase subunit SecG; Involved in protein export. Participates in an early event of protein translocation; Belongs to the SecG family.	Hypothetical protein.	0.837
OPJ56437.1	ctc	CLOTH_08410	CLOTH_20450	Preprotein translocase subunit SecG; Involved in protein export. Participates in an early event of protein translocation; Belongs to the SecG family.	General stress protein CTC; This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance. Belongs to the bacterial ribosomal protein bL25 family. CTC subfamily.	0.903
OPJ56437.1	polA_1	CLOTH_08410	CLOTH_12690	Preprotein translocase subunit SecG; Involved in protein export. Participates in an early event of protein translocation; Belongs to the SecG family.	DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity.	0.557
OPJ56437.1	rplW	CLOTH_08410	CLOTH_18570	Preprotein translocase subunit SecG; Involved in protein export. Participates in an early event of protein translocation; Belongs to the SecG family.	50S ribosomal protein L23; One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome; Belongs to the universal ribosomal protein uL23 family.	0.715
OPJ56437.1	rpmC	CLOTH_08410	CLOTH_18510	Preprotein translocase subunit SecG; Involved in protein export. Participates in an early event of protein translocation; Belongs to the SecG family.	50S ribosomal protein L29; Belongs to the universal ribosomal protein uL29 family.	0.710
OPJ56437.1	secE	CLOTH_08410	CLOTH_18730	Preprotein translocase subunit SecG; Involved in protein export. Participates in an early event of protein translocation; Belongs to the SecG family.	Protein translocase subunit SecE; Essential subunit of the Sec protein translocation channel SecYEG. Clamps together the 2 halves of SecY. May contact the channel plug during translocation.	0.995
OPJ56437.1	secY	CLOTH_08410	CLOTH_18390	Preprotein translocase subunit SecG; Involved in protein export. Participates in an early event of protein translocation; Belongs to the SecG family.	Protein translocase subunit SecY; The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently.	0.991
ctc	OPJ55365.1	CLOTH_20450	CLOTH_14230	General stress protein CTC; This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance. Belongs to the bacterial ribosomal protein bL25 family. CTC subfamily.	Hypothetical protein.	0.551